Man pages for BobLiterman/Rboretum
Compare Phylogenetic Trees and Alignment Support Values
| checkTips | Rboreturm Tip Checker (X) |
| checkValidFiles | Rboretum File Checker |
| combineBootstraps | Rboretum Bootstrap Combiner |
| convertLabels | Rboretum Clade Label Converter |
| detectSingleRoot | Rboreturm Single Root Checker |
| extractNodeAges | Rboretum Node Age Extractor |
| getAlignmentBreakdown | Rboretum Alignment Breaker Downer |
| getAlignmentComposition | Rboretum Alignment Composition Fetcher |
| getAlignmentPatterns | Rboretum Alignment Pattern Fetcher |
| getAlignmentSignal | Rboretum Alignment Signal Fetcher |
| getAlignmentSpecies | Rboretum Alignment Species Fetcher |
| getAlignmentSupport | Rboretum Alignment Signal Support Mapper |
| getSharedTaxa | Rboretum Common Taxa Fetcher |
| getSpeciesComposition | Rboretum Species Composition Fetcher |
| getTreeClades | Rboretum Clade Fetcher |
| getTreeRoot | Rboretum Root Fetcher |
| getTreeSplits | Rboretum Tree Splitter |
| getTreeSplits_Worker | Rboretum Tree Splitter |
| getUniqueTopologies | Rboretum Unique Topology Fetcher |
| isAlignmentSignal | Rboretum Alignment Signal Checker |
| isAlignmentSupport | Rboretum Alignment Support Checker |
| isCladeSupport | Rboretum Clade Support Checker |
| isMultiPhylo | Rboretum MultiPhylo Checker |
| isPhylo | Rboretum Phylo Checker |
| isPlot | Rboretum Plot Checker |
| pie_inset | pie_inset |
| readRooted | Rboretum Rooted Tree Reader |
| readRooted_Worker | Rboretum Rooted Tree Reader |
| rescaleTreeSupport | Rboretum Tree Support Rescaler |
| semiChecker | Rboretum Semi Checker |
| semiSorter | Rboretum Semicolon Sorter |
| semiVector | Rboretum Semicolon Vectorizer |
| sourceRboretum | Rboretum Python Script Sourcer |
| stripNodeLabels | Rboretum Node Label Stripper |
| summarizeMultiPhylo | Rboretum MultiPhylo Summarizer |
| tableCount | Rboretum Table Search |
| tandemPlotter | Rboretum Tandem Plotter Simple cowplot wrapper to plot two or... |
| time_lm | Rboretum Time Linear Modeler |
| timePlotter | Rboretum Time-Dependent Signal Plotter |
| treeDater | Rboretum Tree Dater |
| treeNamer | Rboretum MultiPhylo Autonamer |
| treePlotter | Rboretum Tree Plot Generator |
| treeTrimmer | Rboretum Tree Trimmer |
| vectorSemi | Rboretum Vector Semicolonizer |
