checkValidFiles: Rboretum File Checker

In BobLiterman/Rboretum: Compare Phylogenetic Trees and Alignment Support Values

Rboretum File Checker

Description

This function takes one or more file paths, and returns TRUE if all paths point to valid files, and FALSE otherwise. If return_full_path = TRUE and all paths are valid, function returns absolute paths. If return_invalid = TRUE and there are invalid paths, function returns invalid paths.

Usage

checkValidFiles(alignment_path, return_full_path, return_invalid)

Arguments

alignment_path	A character vector of one or more alignment file paths (relative or absolute)
return_full_path	OPTIONAL: If TRUE and all paths are valid, function returns absolute paths [Default: FALSE]
return_invalid	OPTIONAL: If TRUE and any paths are invalid, function returns invalid paths [Default: FALSE]

Value

TRUE if all paths point to valid files, otherwise FALSE. If return_full_path = TRUE and all paths are valid, function returns absolute paths. If return_invalid = TRUE and there are invalid paths, function returns invalid paths.

BobLiterman/Rboretum documentation built on July 6, 2023, 7:46 p.m.