API for CBIIT-CGBB/OmicPath
OmicPath
| Global functions | |
|---|---|
| ES | Man page Source code |
| GO_hs | Man page |
| GO_mm | Man page |
| GSEA.db | Man page |
| KEGG | Man page |
| KEGG_mm | Man page |
| KEGGplot | Man page Source code |
| MGI_GenePheno_hs | Man page |
| MGI_GenePheno_mm | Man page |
| MGI_PhenoGenoMP_hs | Man page |
| MGI_PhenoGenoMP_mm | Man page |
| MouseCyc | Man page |
| NeST | Man page |
| OmicPath | Man page |
| PID_KEGG | Man page |
| PID_KEGG_mm | Man page |
| PID_NCI_Nature_Curated | Man page |
| PID_NCI_Nature_Curated_mm | Man page |
| PID_biocarta | Man page |
| PID_biocarta_mm | Man page |
| ReactomePathways | Man page |
| WGCNA_6_1 | Man page Source code |
| WGCNA_6_2 | Man page Source code |
| WGCNA_6_3 | Man page Source code |
| WGCNA_6_4 | Man page Source code |
| WGCNA_6_5 | Man page Source code |
| WGCNA_6_6 | Man page Source code |
| WGCNA_dissTOM | Man page Source code |
| WGCNA_dissTOM2network | Man page Source code |
| color.bar | Source code |
| color_bar | Man page Source code |
| cosine_sim | Source code |
| db_names | Man page Source code |
| doGSEA | Man page Source code |
| doGSEA_all | Source code |
| do_neighborhood | Man page Source code |
| ftest2sets | Source code |
| hclustplotn | Source code |
| hs2mm | Man page Source code |
| htest2sets | Source code |
| jaccard_distance | Source code |
| jaccard_sim | Source code |
| mm2hs | Man page Source code |
| msigdb.c1 | Man page |
| msigdb.c2 | Man page |
| msigdb.c2.cgp | Man page |
| msigdb.c2.cp.biocarta | Man page |
| msigdb.c2.cp.kegg | Man page |
| msigdb.c2.cp.reactome | Man page |
| msigdb.c3 | Man page |
| msigdb.c3.mir | Man page |
| msigdb.c3.tft | Man page |
| msigdb.c4 | Man page |
| msigdb.c4.cgn | Man page |
| msigdb.c4.cm | Man page |
| msigdb.c5 | Man page |
| msigdb.c5.bp | Man page |
| msigdb.c5.cc | Man page |
| msigdb.c6 | Man page |
| msigdb.c7 | Man page |
| msigdb.c8 | Man page |
| msigdb.h | Man page |
| msigdb.mm1.all | Man page |
| msigdb.mm2.all | Man page |
| msigdb.mm2.cgp | Man page |
| msigdb.mm2.cp | Man page |
| msigdb.mm2.cp.biocarta | Man page |
| msigdb.mm2.cp.reactome | Man page |
| msigdb.mm2.cp.wikipathways | Man page |
| msigdb.mm3.all | Man page |
| msigdb.mm3.gtrd | Man page |
| msigdb.mm3.mirdb | Man page |
| msigdb.mm5.all | Man page |
| msigdb.mm5.go | Man page |
| msigdb.mm5.go.bp | Man page |
| msigdb.mm5.go.cc | Man page |
| msigdb.mm5.go.mf | Man page |
| msigdb.mm5.mpt | Man page |
| msigdb.mm8.all | Man page |
| msigdb.mmh.all | Man page |
| myColorRamp | Source code |
| overlap_coef | Source code |
| pathway_append | Man page Source code |
| pathway_creator | Man page Source code |
| pathway_delete | Man page Source code |
| pathway_search | Man page Source code |
| pathway_update | Man page Source code |
| plotKEGG | Man page Source code |
| plotNet | Man page |
| similarity | Man page Source code |
| steiner_net | Man page Source code |
