getDrugActivityData: Returns a matrix containing activity (-logGI50) data for a...
In CBIIT/rcellminer: rcellminer: Molecular Profiles, Drug Response, and Chemical Structures for the NCI-60 Cell Lines
View source: R/getDrugActivityData.R
getDrugActivityData R Documentation
Returns a matrix containing activity (-logGI50) data for a set of compounds.
Description
Returns a matrix containing activity (-logGI50) data for a set of compounds.
Usage
getDrugActivityData(nscSet, onlyCellMinerExps = TRUE)
Arguments
nscSet
A string specifying the NSC identifiers for the compounds.
onlyCellMinerExps
A logical value indicating whether to compute results
using only experimental data included in CellMiner (default=TRUE).
Value
a matrix with NCI-60 average (over experiments) -logGI50 activity
data; compound activity profiles are along rows.
Examples
nscSet <- c("141540", "123127") # Etoposide, Doxorubicin.
actData <- getDrugActivityData(nscSet)
CBIIT/rcellminer documentation built on Aug. 8, 2024, 12:15 p.m.
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View source: R/getDrugActivityData.R
| getDrugActivityData | R Documentation |
Returns a matrix containing activity (-logGI50) data for a set of compounds.
Description
Returns a matrix containing activity (-logGI50) data for a set of compounds.
Usage
getDrugActivityData(nscSet, onlyCellMinerExps = TRUE)
Arguments
nscSet |
A string specifying the NSC identifiers for the compounds. |
onlyCellMinerExps |
A logical value indicating whether to compute results using only experimental data included in CellMiner (default=TRUE). |
Value
a matrix with NCI-60 average (over experiments) -logGI50 activity data; compound activity profiles are along rows.
Examples
nscSet <- c("141540", "123127") # Etoposide, Doxorubicin.
actData <- getDrugActivityData(nscSet)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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