Files in CC-HIC/ccdata
The critical care clinical data toolbox
.gitignore
DESCRIPTION
LICENSE
Makefile
NAMESPACE
R/RcppExports.R
R/ccRecord.R
R/ccTable.R
R/create2dclean.R
R/data.quality.report.R
R/deltaTime.R
R/filter.categorical.R
R/filter.missingness.R
R/filter.range.R
R/imputation.R
R/pipeline.R
R/reallocateTime.R
R/selectTable.R
R/sql_demographic.R
R/stdid.R
R/summary.R
R/unique.spell.R
R/utilities.R
R/xml2ccdata.R
R/zzz.R
README.md
appveyor.yml
data/ANALYSIS_REF.yaml
data/ITEM_REF.yaml
data/ITEM_REFTABLE.RData
data/accept_completeness.yaml
inst/conf/ANALYSIS_REF.yaml
inst/conf/ITEM_REF.yaml
inst/conf/accept_completeness.yaml
inst/conf/icnarc_codes.csv
inst/doc/apache.R
inst/doc/apache.Rmd
inst/doc/apache.html
inst/doc/test.R
inst/doc/test.Rmd
inst/doc/test.html
inst/doc/tour.R
inst/doc/tour.Rmd
inst/doc/tour.html
inst/pipeline/break_into.sh
inst/pipeline/combine_data.r
inst/pipeline/convert.r
inst/pipeline/extract_data.r
inst/pipeline/pipeline.sh
inst/pipeline/reduce_xml.sh
inst/pipeline/shortname2.csv
inst/pipeline/untimeit.r
inst/report/bar.png
inst/report/ccd_color.png
inst/report/ccd_gray.png
inst/report/data_quality_report.Rmd
inst/report/listings-setup.tex
inst/report/report.latex
inst/sql/create_table.sql
inst/sql/simple.sql
inst/sql/test_mongo.r
man/StdId.Rd
man/add.episode.list.to.record.Rd
man/add.episode.to.record.Rd
man/add.record.to.record.Rd
man/as.number.Rd
man/ccEpisode-class.Rd
man/ccRecord-class.Rd
man/ccRecord_subset_files.Rd
man/ccTable-class.Rd
man/code2stname.Rd
man/create.cctable.Rd
man/create2dclean.Rd
man/data.checklist.Rd
man/data.quality.report.Rd
man/data.quality.report.brc.Rd
man/deltaTime.Rd
man/demg.distribution.Rd
man/demographic.data.completeness.Rd
man/demographic.patient.spell.Rd
man/extractIndexTable.Rd
man/extractInfo.Rd
man/extract_file_origin.Rd
man/file.summary.Rd
man/for_each_episode.Rd
man/getEpisodePeriod.Rd
man/getItemInfo.Rd
man/getXmlepisode.Rd
man/getfilter.Rd
man/inrange.Rd
man/is.demographic.Rd
man/is.drugs.Rd
man/is.laboratory.Rd
man/is.physiology.Rd
man/lookup.items.Rd
man/new.episode.Rd
man/parse.new.xml.Rd
man/physio.distribution.Rd
man/plus-ccRecord-NULL-method.Rd
man/plus-ccRecord-ccEpisode-method.Rd
man/plus-ccRecord-ccRecord-method.Rd
man/plus-ccRecord-list-method.Rd
man/reallocateTimeRecord.Rd
man/samplerate2d.Rd
man/selectTable.Rd
man/site.info.Rd
man/sql.demographic.table.Rd
man/stname2code.Rd
man/stname2longname.Rd
man/sub-ccRecord-ANY-method.Rd
man/sub-ccRecord-character-method.Rd
man/sub-sub-ccRecord-method.Rd
man/table1.Rd
man/total.data.point.Rd
man/unique_spell.Rd
man/update_database.Rd
man/which.classification.Rd
man/whichIsCode.Rd
man/xml.file.duration.plot.Rd
man/xml.site.duration.plot.Rd
man/xml2Data.Rd
man/xmlLoad.Rd
man/xmlTime2POSIX.Rd
src/Makevars
src/RcppExports.cpp
src/collapseTime.cpp
src/symbols.rds
tests/data/ANALYSIS_REF.yaml
tests/data/break_into.sh
tests/data/check_config.yaml
tests/data/test_2yml.yml
tests/data/test_aggregate_patients.xml
tests/data/test_analysis_ref.yaml
tests/data/test_data_anonym.xml
tests/data/test_sofa.yml
tests/data/test_spec.yml
tests/testthat.R
tests/testthat/test_0_load_xml.r
tests/testthat/test_ccdatatable.r
tests/testthat/test_create2dclean.r
tests/testthat/test_deltaTime.r
tests/testthat/test_demographic.r
tests/testthat/test_patientIndex.r
tests/testthat/test_pipeline.r
tests/testthat/test_range_filter.r
tests/testthat/test_reallocateTime.r
tests/testthat/test_record2.r
tests/testthat/test_report.r
tests/testthat/test_selectTable.r
tests/testthat/test_stdid.r
tests/testthat/test_xml_data.r
