assert_rnaseq_df_is_formatted_correctly: Check RNAseq Dataframe
In CCICB/CRUX: Easily explore patterns of somatic variation in cancer using 'CRUX'
View source: R/data_loading_utils.R
assert_rnaseq_df_is_formatted_correctly R Documentation
Check RNAseq Dataframe
Description
Runs a bunch of assertions on the supplied rnaseq dataframe to determine whether it is valid.
Will error if it is not.
Usage
assert_rnaseq_df_is_formatted_correctly(rnaseq_df)
Arguments
rnaseq_df
Dataframe containing at least three columns, named "Tumor_Sample_Barcode", "Hugo_Symbol" and "TPM". May optionally include columns named "Fold_Change" and "Transcript" (dataframe)
Value
Nothing, run for its side effects
CCICB/CRUX documentation built on Jan. 28, 2024, 10:12 p.m.
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View source: R/data_loading_utils.R
| assert_rnaseq_df_is_formatted_correctly | R Documentation |
Check RNAseq Dataframe
Description
Runs a bunch of assertions on the supplied rnaseq dataframe to determine whether it is valid. Will error if it is not.
Usage
assert_rnaseq_df_is_formatted_correctly(rnaseq_df)
Arguments
rnaseq_df |
Dataframe containing at least three columns, named "Tumor_Sample_Barcode", "Hugo_Symbol" and "TPM". May optionally include columns named "Fold_Change" and "Transcript" (dataframe) |
Value
Nothing, run for its side effects
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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