gistic_tabulate_amp_or_del_genes_file: Tabulate Gistic Gene Files
In CCICB/CRUX: Easily explore patterns of somatic variation in cancer using 'CRUX'
gistic_tabulate_amp_or_del_genes_file R Documentation
Tabulate Gistic Gene Files
Description
Parses a gistic path_to_amp_or_del_genes_file
Usage
gistic_tabulate_amp_or_del_genes_file(path_to_amp_or_del_genes_file)
Arguments
path_to_amp_or_del_genes_file
path to either del_genes.conf_XX.txt OR amp_genes.conf_90.txt. These files can be produced using gistic (string)
Value
a dataframe containing cytobands, q values, peak locations and which genes are in each peak
CCICB/CRUX documentation built on Jan. 28, 2024, 10:12 p.m.
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| gistic_tabulate_amp_or_del_genes_file | R Documentation |
Tabulate Gistic Gene Files
Description
Parses a gistic path_to_amp_or_del_genes_file
Usage
gistic_tabulate_amp_or_del_genes_file(path_to_amp_or_del_genes_file)
Arguments
path_to_amp_or_del_genes_file |
path to either del_genes.conf_XX.txt OR amp_genes.conf_90.txt. These files can be produced using gistic (string) |
Value
a dataframe containing cytobands, q values, peak locations and which genes are in each peak
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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