Description Usage Arguments Value Note Author(s) References See Also Examples
View source: R/ba_germplasm_search.R
Retrieve germplasm information as result of a GET search.
1 2 3 4 | ba_germplasm_search(con = NULL, germplasmPUI = "",
germplasmDbId = "", germplasmName = "", commonCropName = "",
pageSize = 1000, page = 0, rclass = c("tibble", "data.frame",
"list", "json"))
|
con |
list, brapi connection object |
germplasmPUI |
character, search for germplasm information using a Permanent Unique Identifier (DOI, URI, etc.); default: "" |
germplasmDbId |
character, search for germplasm information using an internal germplasm database identifier; default: "" |
germplasmName |
character, search for germplasm information using the name of the germplasm; default: "" |
commonCropName |
character, search for germplasm information using the common crop name related to the germplasm; default: "" |
pageSize |
integer, items per page to be returned; default: 1000 |
page |
integer, the requested page to be returned; default: 0 (1st page) |
rclass |
character, class of the object to be returned; default: "tibble" , possible other values: "data.frame"/"list"/"json" |
An object of class as defined by rclass containing the germaplasm information result of the search.
Tested against: test-server, BMS
BrAPI Version: 1.0, 1.1, 1.2
BrAPI Status: active
Reinhard Simon, Maikel Verouden
Other brapicore: ba_calls
,
ba_commoncropnames
, ba_crops
,
ba_germplasm_details_study
,
ba_germplasm_details
,
ba_germplasm_pedigree
,
ba_germplasm_progeny
,
ba_germplasm_search_post
,
ba_observationvariables_datatypes
,
ba_observationvariables_details
,
ba_observationvariables_ontologies
,
ba_observationvariables
,
ba_phenotypes_search_post
,
ba_programs_search_post
,
ba_programs
,
ba_studies_germplasm_details
,
ba_traits_details
, ba_traits
Other genotyping: ba_genomemaps_data_range
,
ba_genomemaps_data
,
ba_genomemaps_details
,
ba_genomemaps
,
ba_germplasm_attributes
,
ba_germplasm_markerprofiles
,
ba_germplasm_search_post
,
ba_germplasmattributes_attributes
,
ba_germplasmattributes_categories
,
ba_germplasmattributes_details
,
ba_markerprofiles_allelematrices_details
,
ba_markerprofiles_allelematrices_search_post
,
ba_markerprofiles_allelematrices_search
,
ba_markerprofiles_allelematrix_search
,
ba_markerprofiles_details
,
ba_markerprofiles_search
,
ba_markers_details
,
ba_markers_search_post
,
ba_markers_search
Other germplasm: ba_germplasm_breedingmethods
,
ba_germplasm_details_study
,
ba_germplasm_details
,
ba_germplasm_markerprofiles
,
ba_germplasm_pedigree
,
ba_germplasm_progeny
,
ba_germplasm_search_post
,
ba_studies_germplasm_details
1 2 3 4 5 6 7 8 9 | if (interactive()) {
library(brapi)
con <- ba_db()$testserver
ba_germplasm_search(con, germplasmDbId = "1")
}
|
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