Description Usage Arguments Value Note Author(s) References See Also Examples
View source: R/ba_germplasm_search_post.R
Retrieve germplasm information as result of a POST search.
1 2 3 4 5 | ba_germplasm_search_post(con = NULL, germplasmPUIs = "",
germplasmDbIds = "", germplasmSpecies = "", germplasmGenus = "",
germplasmNames = "", accessionNumbers = "", commonCropName = "",
pageSize = 1000, page = 0, rclass = c("tibble", "data.frame",
"list", "json"))
|
con |
brapi connection object |
germplasmPUIs |
character vector, search for germplasm information using multiple Permanent Unique Identifiers (DOI, URI, etc.) e.g. c("http://www.crop-diversity.org/mgis/accession/01BEL084609", "doi:10.15454/328757862534E12"); default: "" |
germplasmDbIds |
character vector, search for germplasm information using internal germplasm database identifiers e.g. c("986", "01BEL084609"); default: "" |
germplasmSpecies |
character vector, search for germplasm information using species names e.g. c("aestivum", "vinifera"); default: "" |
germplasmGenus |
character vector, search for germplasm information using genus names e.g. c("Solanum", "Triticum"); default: "" |
germplasmNames |
character vector, search for germplasm information using the names of germplasm e.g. c("XYZ1", "Pahang"); default: "" |
accessionNumbers |
character vector, search for germplasm information using accession numbers e.g. c("ITC0609", "ITC0685"); default: "" |
commonCropName |
character, search for germplasm information using the common crop name related to the germplasm e.g. "wheat"; default: "" |
pageSize |
integer, items per page to be returned; default: 1000 |
page |
integer, the requested page to be returned; default: 0 (1st page) |
rclass |
character, class of the object to be returned; default: "tibble" , possible other values: "data.frame"/"list"/"json" |
An object of class as defined by rclass containing the germplasm information fulfilling the search criteria.
Tested against: test-server
BrAPI Version: 1,0. 1.1, 1.2
BrAPI Status: active
Reinhard Simon, Maikel Verouden
Other brapicore: ba_calls
,
ba_commoncropnames
, ba_crops
,
ba_germplasm_details_study
,
ba_germplasm_details
,
ba_germplasm_pedigree
,
ba_germplasm_progeny
,
ba_germplasm_search
,
ba_observationvariables_datatypes
,
ba_observationvariables_details
,
ba_observationvariables_ontologies
,
ba_observationvariables
,
ba_phenotypes_search_post
,
ba_programs_search_post
,
ba_programs
,
ba_studies_germplasm_details
,
ba_traits_details
, ba_traits
Other genotyping: ba_genomemaps_data_range
,
ba_genomemaps_data
,
ba_genomemaps_details
,
ba_genomemaps
,
ba_germplasm_attributes
,
ba_germplasm_markerprofiles
,
ba_germplasm_search
,
ba_germplasmattributes_attributes
,
ba_germplasmattributes_categories
,
ba_germplasmattributes_details
,
ba_markerprofiles_allelematrices_details
,
ba_markerprofiles_allelematrices_search_post
,
ba_markerprofiles_allelematrices_search
,
ba_markerprofiles_allelematrix_search
,
ba_markerprofiles_details
,
ba_markerprofiles_search
,
ba_markers_details
,
ba_markers_search_post
,
ba_markers_search
Other germplasm: ba_germplasm_breedingmethods
,
ba_germplasm_details_study
,
ba_germplasm_details
,
ba_germplasm_markerprofiles
,
ba_germplasm_pedigree
,
ba_germplasm_progeny
,
ba_germplasm_search
,
ba_studies_germplasm_details
1 2 3 4 5 6 7 8 9 | if (interactive()) {
library(brapi)
con <- ba_db()$testserver
ba_germplasm_search_post(con, germplasmDbIds = c("1", "2"))
}
|
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