callOneSubtype: callOneSubtype Make subtype calls for one sample
In CRI-iAtlas/ImmuneSubtypeClassifier: An R package for classification of immune subtypes, in cancer, using gene expression data.
callOneSubtype R Documentation
callOneSubtype
Make subtype calls for one sample
Description
callOneSubtype
Make subtype calls for one sample
Usage
callOneSubtype(mods, X, ci)
Arguments
mods
xgboost model list
X
gene expression matrix, genes in rows, samples in columns
ci
cluster label, and index into mods
Value
preds of one cluster model.
Examples
calli <- callOneSubtype(mods, X, 4)
CRI-iAtlas/ImmuneSubtypeClassifier documentation built on Oct. 1, 2022, 10:50 a.m.
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| callOneSubtype | R Documentation |
callOneSubtype Make subtype calls for one sample
Description
callOneSubtype Make subtype calls for one sample
Usage
callOneSubtype(mods, X, ci)
Arguments
mods |
xgboost model list |
X |
gene expression matrix, genes in rows, samples in columns |
ci |
cluster label, and index into mods |
Value
preds of one cluster model.
Examples
calli <- callOneSubtype(mods, X, 4)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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