API for CenterForStatistics-UGent/combi
Compositional omics model based visual integration
| Global functions | |
|---|---|
| addLink | Man page Source code |
| arrayMult | Man page Source code |
| buildCentMat | Man page Source code |
| buildCompMat | Man page Source code |
| buildConfMat | Man page Source code |
| buildCovMat | Man page Source code |
| buildEmptyJac | Man page Source code |
| buildMarginalOffset | Man page Source code |
| buildMu | Man page Source code |
| buildMuMargins | Man page Source code |
| buildOffsetModel | Man page Source code |
| checkAlias | Man page Source code |
| checkMeanVarTrend | Man page Source code |
| checkMonotonicity | Man page Source code |
| combi | Man page Source code |
| convPlot | Man page Source code |
| deriv2LagrangianFeatures | Man page Source code |
| deriv2LagrangianLatentVars | Man page Source code |
| deriv2LagrangianLatentVarsConstr | Man page Source code |
| derivLagrangianFeatures | Man page Source code |
| derivLagrangianLatentVars | Man page Source code |
| derivLagrangianLatentVarsConstr | Man page Source code |
| estFeatureParameters | Man page Source code |
| estIndepModel | Man page Source code |
| estLatentVars | Man page Source code |
| estMeanVarTrend | Man page Source code |
| estOff | Man page Source code |
| extractCoords | Man page Source code |
| extractData | Man page Source code |
| extractMat | Man page |
| extractMat,ExpressionSet-method | Man page |
| extractMat,SummarizedExperiment-method | Man page |
| extractMat,matrix-method | Man page |
| filterConfounders | Man page Source code |
| getInflLatentVar | Man page Source code |
| gramSchmidtOrth | Man page Source code |
| indentPlot | Man page Source code |
| inflPlot | Man page Source code |
| influence.combi | Man page Source code |
| jacConfounders | Man page Source code |
| jacConfoundersComp | Man page Source code |
| jacFeatures | Man page Source code |
| jacLatentVars | Man page Source code |
| jacLatentVarsConstr | Man page Source code |
| plot.combi | Man page Source code |
| polyHorner | Man page Source code |
| predictSpline | Man page Source code |
| prepareJacMat | Man page Source code |
| prepareJacMatComp | Man page Source code |
| prepareScoreMat | Man page Source code |
| print.combi | Man page Source code |
| quasiJacIndep | Man page Source code |
| quasiScoreIndep | Man page Source code |
| rowMultiply | Man page Source code |
| scaleCoords | Man page Source code |
| scoreConfounders | Man page Source code |
| scoreConfoundersComp | Man page Source code |
| scoreFeatureParams | Man page Source code |
| scoreLatentVars | Man page Source code |
| seqM | Man page Source code |
| trimOnConfounders | Man page Source code |
| zhangMetabo | Man page |
| zhangMetavars | Man page |
| zhangMicrobio | Man page |
