print.combi: Print an overview of a fitted combi x

In CenterForStatistics-UGent/combi: Compositional omics model based visual integration

Print an overview of a fitted combi x

Description

Print an overview of a fitted combi x

Usage

## S3 method for class 'combi'
print(x, ...)

Arguments

x	a fitted combi x
...	Further arguments, currently ignored

Value

An overview of the number of dimensions, views and parameters, type of ordination and importance parameters

Examples

data(Zhang)
## Not run: 
#Unconstrained
microMetaboInt = combi(
list("microbiome" = zhangMicrobio, "metabolomics" = zhangMetabo),
distributions = c("quasi", "gaussian"), compositional = c(TRUE, FALSE),
logTransformGaussian = FALSE, verbose = TRUE)
#Constrained
microMetaboIntConstr = combi(
    list("microbiome" = zhangMicrobio, "metabolomics" = zhangMetabo),
    distributions = c("quasi", "gaussian"), compositional = c(TRUE, FALSE),
    logTransformGaussian = FALSE, covariates = zhangMetavars, verbose = TRUE)
## End(Not run)
    #Load the fits
load(system.file("extdata", "zhangFits.RData", package = "combi"))
print(microMetaboInt)
print(microMetaboIntConstr)
#Or simply
microMetaboInt

CenterForStatistics-UGent/combi documentation built on Aug. 22, 2023, 11:02 p.m.