Files in Chang-Yu-Chang/MigrationCommunity
Microbial Consumer-Resource Model
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/.DS_Store
R/CR_model.R
R/CR_ode.R
R/RcppExports.R
R/adjacency_make.R
R/beta_diversity.R
R/community_coalesce.R
R/community_coalesce2.R
R/community_generate.R
R/dist_to_diag.R
R/elo_rank.R
R/family_abundance_plot.R
R/heatmap_network_plot.R
R/motif_count.R
R/network_make.R
R/network_plot.R
R/network_randomize.R
R/null_network_make.R
R/parameter_load.R
R/parameter_read.R
R/parameter_write.R
R/pool_build.R
R/result_isolate_read.R
R/result_pair_read.R
R/result_read.R
R/stab_pool_make.R
README.md
data/.DS_Store
data/procesed/example_parameter.RData
data/procesed/species_pool.RData
data/procesed/species_pool2.RData
data/raw/.DS_Store
data/raw/DATASET.R
man/CR_model.Rd
man/CR_ode.Rd
man/adjacency_make.Rd
man/beta_diversity.Rd
man/commnity_generate.Rd
man/community_coalesce.Rd
man/community_coalesce2.Rd
man/dist_to_diag.Rd
man/elo_rank.Rd
man/heatmap_network_plot.Rd
man/motif_count.Rd
man/network_make.Rd
man/network_plot.Rd
man/network_randomize.Rd
man/null_network_make.Rd
man/parameter_load.Rd
man/parameter_write.Rd
man/pool_build.Rd
man/relative_abundance_plot.Rd
man/result_isolate_read.Rd
man/result_pair_read.Rd
man/result_read.Rd
man/stab_pool_build.Rd
micro.crm.Rproj
output/.DS_Store
output/parameter/example001.txt
output/parameter/self-assembly001.txt
output/parameter/self-assembly002.txt
output/parameter/self-assembly003.txt
output/parameter/self-assembly004.txt
output/parameter/self-assembly005.txt
output/parameter/self-assembly006.txt
output/parameter/self-assembly007.txt
output/parameter/self-assembly008.txt
output/parameter/self-assembly009.txt
output/report/Untitled.Rmd
output/report/Untitled.nb.html
output/report/migration-parent_analysis.Rmd
output/report/migration-size.Rmd
output/report/migration-size.nb.html
output/report/migration.Rmd
output/report/migration_analysis.Rmd
output/report/migration_temp.Rmd
output/report/motif_null.Rmd
output/report/self-assembly-batch_analysis.Rmd
output/report/self-assembly_analysis.Rmd
output/report/self-assembly_analysis.nb.html
output/report/self_assembly.Rmd
output/report/self_assembly.nb.html
output/report/test.Rmd
output/report/test.nb.html
output/report/tutorial.nb.html
output/script/example001.R
output/script/migration-global.R
output/script/migration-parent.R
output/script/migration-parent_analysis.R
output/script/migration-size_analysis.R
output/script/motif_null.R
output/script/network_randomize.R
output/script/self-assembly-batch.R
output/script/self-assembly.R
output/script/self-assembly_analysis.R
output/script/self-assembly_isolate.R
output/script/self-assembly_pair.R
output/script/template_function.R
src/.DS_Store
src/.gitignore
src/RcppExports.cpp
src/rcpp_hello_world.cpp
vignettes/.DS_Store
vignettes/.gitignore
vignettes/tutorial.Rmd
