API for CharlesJB/metagene
A package to produce metagene plots
| Global functions | |
|---|---|
| Bam_Handler | Man page |
| avoid_gaps_update | Man page Source code |
| bed_file_filter | Man page |
| exon_by_gene_with_observed_transcripts | Man page |
| get_broadpeak_region | Source code |
| get_coverage_bam_file | Source code |
| get_coverage_region | Source code |
| get_demo_bam_files | Man page Source code |
| get_demo_design | Man page Source code |
| get_demo_metagene | Man page Source code |
| get_demo_regions | Man page Source code |
| get_different_seqnames_bam_file | Source code |
| get_narrowpeak_region | Source code |
| get_not_indexed_bam_file | Source code |
| get_promoters_txdb | Man page Source code |
| intoNbins | Source code |
| metagene | Man page |
| permutation_test | Man page Source code |
| plot_metagene | Man page Source code |
| promoters_hg18 | Man page |
| promoters_hg19 | Man page |
| promoters_mm10 | Man page |
| promoters_mm9 | Man page |
| read.BAM | Source code |
| write_bed_file_filter_result | Man page Source code |
