Description Usage Arguments Value Examples
Transforms the bed_file_filter function output into a file.BED readable by metagene.
1 2 | write_bed_file_filter_result(bed_file_filter_result, file = "file_name",
path = "./")
|
bed_file_filter_result |
A |
file |
the name of the output file without the extension |
path |
The path where the function will write the file |
output of write function
1 2 3 4 5 6 7 8 9 10 11 12 | ## Not run:
require(EnsDb.Hsapiens.v86)
edb <- EnsDb.Hsapiens.v86
quantification_files <- 'file_path'
ebgwot <- exon_by_gene_with_observed_transcripts(edb,
quantification_files)
bed_file_content_gr <- GRanges("chr16",ranges = IRanges(start=23581002,
end=23596356))
bffr <- bed_file_filter(ebgwot, bed_file_content_gr)
write_bed_file_filter_result(bffr, file='test','./')
## End(Not run)
|
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