Files in CharlieCarpenter/tidyMicro
A Pipeline for Microbiome Analysis and Visualization
.DS_Store
.Rbuildignore
.Rhistory
.Rproj.user/E744F726/cpp-definition-cache
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.gitignore
DESCRIPTION
NAMESPACE
R/.DS_Store
R/Data_BPD_Class.R
R/Data_BPD_Clin.R
R/Data_BPD_Family.R
R/Data_BPD_Order.R
R/Data_BPD_Phylum.R
R/Data_MRSA_Clin.R
R/Data_MRSA_Gen.R
R/Williamson_funs.R
R/alpha_div.R
R/alpha_div_helper.R
R/bb_agg_bar.R
R/bb_bars.R
R/bb_bars_helper.R
R/bb_mods.R
R/bb_mods_helper.R
R/beta_divs.R
R/beta_heatmap.R
R/box_plot.R
R/cor_heatmap.R
R/cor_rocky_mtn.R
R/filter_funs.R
R/filter_funs_helper.R
R/micro_PERMANOVA.R
R/micro_PERMANOVA_helper.R
R/micro_alpha_reg.R
R/micro_chisq.R
R/micro_forest.R
R/micro_heatmap.R
R/micro_otu.R
R/micro_pca.R
R/micro_pca_helper.R
R/micro_rank_sum.R
R/micro_rocky_mtn.R
R/nb_bars.R
R/nb_bars_helper.R
R/nb_mods.R
R/nb_mods_helper.R
R/pca_3d.R
R/pca_helper.R
R/pull_lev.R
R/ra_bars.R
R/rocky_mtn_helper.R
R/taxa_summary.R
R/three_mode_pca.R
R/tidy_micro.R
R/tidy_micro_helper.R
R/utils-pipe.R
R/utils-tidy-eval.R
README.Rmd
README.md
data/bpd_cla.rda
data/bpd_clin.rda
data/bpd_fam.rda
data/bpd_ord.rda
data/bpd_phy.rda
data/mrsa_clin.rda
data/mrsa_gen.rda
man/alpha_div.Rd
man/bb_bars.Rd
man/bb_mods.Rd
man/beta_div.Rd
man/beta_heatmap.Rd
man/bpd_cla.Rd
man/bpd_clin.Rd
man/bpd_fam.Rd
man/bpd_ord.Rd
man/bpd_phy.Rd
man/cor_heatmap.Rd
man/cor_rocky_mtn.Rd
man/micro_PERMANOVA.Rd
man/micro_alpha_reg.Rd
man/micro_chisq.Rd
man/micro_forest.Rd
man/micro_heatmap.Rd
man/micro_otu.Rd
man/micro_pca.Rd
man/micro_rank_sum.Rd
man/micro_rocky_mtn.Rd
man/mrsa_clin.Rd
man/mrsa_gen.Rd
man/nb_bars.Rd
man/nb_mods.Rd
man/otu_filter.Rd
man/pca_3d.Rd
man/pipe.Rd
man/pull_lev.Rd
man/ra_bars.Rd
man/taxa_boxplot.Rd
man/taxa_summary.Rd
man/three_mode.Rd
man/tidy_micro.Rd
man/tidyeval.Rd
tests/.DS_Store
tests/testthat.R
tests/testthat/.DS_Store
tests/testthat/test_alpha_div.R
tests/testthat/test_bb_bars.R
tests/testthat/test_beta_heatmap.R
tests/testthat/test_chisq_rank_sum.R
tests/testthat/test_cor_heatmap.R
tests/testthat/test_cor_rocky_mtn.R
tests/testthat/test_micro_forest.R
tests/testthat/test_micro_heatmap.R
tests/testthat/test_micro_pca.R
tests/testthat/test_micro_rocky_mtn.R
tests/testthat/test_nb_bars.R
tests/testthat/test_otu_filters.R
tests/testthat/test_pca_3d.R
tests/testthat/test_ra_bars.R
tests/testthat/test_tidyMicro.R
tidyMicro.Rproj
vignettes/.gitignore
vignettes/tidy_micro_vignette.Rmd
