Description Usage Arguments Value
View source: R/make_de_plots.R
Runs differential expression and creates relevant plots for a ser object
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ser |
The Seurat object to use |
list_ser |
List of DE seurat object |
feats |
A subset of featurs to run DE (I.E. only surface markers) If NULL then will run on all genes |
out_dir |
Directory to write plots and save markers. |
cols |
Name vector of colors by cluster |
feature_plots |
Whether or not to include feature plots in the pdf output. |
meta |
subset that you want to graph |
Creates plots in user inputted directory
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