Description Usage Arguments Value Examples
View source: R/plot_distatis.R
DiSTATIS plot of posterior or bootstrap samples
1 2 3 4 5 6 7 8 | plot_distatis(
obj,
ndraws = 1000,
ncores = 1,
show_donors = TRUE,
show_markers = TRUE,
repel = TRUE
)
|
obj |
Object of class |
ndraws |
Number of posterior or bootstrap samples |
ncores |
Number of cores |
show_donors |
Include donor random effect |
show_markers |
Include markers |
repel |
Repel marker names |
ggplot2
object
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 | ## Not run:
set.seed(1)
df = simulate_data()
str(df)
fit = poisson_lognormal(df,
protein_names = names(df)[3:ncol(df)],
condition = "condition",
group = "donor",
r_donor = 2,
warmup = 200, iter = 325, adapt_delta = 0.95,
num_chains = 1)
plot_distatis(fit, ndraws = 125)
fit = poisson_lognormal_mcle(df,
protein_names = names(df)[3:ncol(df)],
condition = "condition",
group = "donor",
ncores = 1)
plot_distatis(fit, ndraws = 125)
## End(Not run)
|
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