CompEpigen/methrix: Fast and efficient summarization of generic bedGraph files from Bisufite sequencing

Bedgraph files generated by Bisulfite pipelines often come in various flavors. Critical downstream step requires summarization of these files into methylation/coverage matrices. This step of data aggregation is done by Methrix, including many other useful downstream functions.

Getting started

Package details

Bioconductor views Coverage DNAMethylation Sequencing
Maintainer
LicenseMIT + file LICENSE
Version1.8.01
URL https://github.com/CompEpigen/methrix
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("CompEpigen/methrix")
CompEpigen/methrix documentation built on July 24, 2024, 5:49 p.m.