API for CompEpigen/methrix
Fast and efficient summarization of generic bedGraph files from Bisufite sequencing
| Global functions | |
|---|---|
| combine_methrix | Man page Source code |
| convert_HDF5_methrix | Man page |
| convert_methrix | Man page |
| coverage_filter | Man page Source code |
| create_methrix | Source code |
| extract_CPGs | Man page Source code |
| get_matrix | Man page Source code |
| get_palette | Source code |
| get_region_summary | Man page Source code |
| get_source_idx | Source code |
| get_stats | Man page Source code |
| gr.nochr | Source code |
| is_h5 | Source code |
| load_HDF5_methrix | Man page |
| mask_methrix | Man page Source code |
| merge_vect_code | Source code |
| methrix | Man page |
| methrix-class | Man page |
| methrix2bsseq | Man page Source code |
| methrix_data | Man page |
| methrix_pca | Man page Source code |
| methrix_report | Man page Source code |
| order_by_sd | Man page Source code |
| parse_source_idx | Source code |
| plot_coverage | Man page Source code |
| plot_density | Man page Source code |
| plot_pca | Man page Source code |
| plot_stats | Man page Source code |
| plot_violin | Man page Source code |
| prepare_plot_data | Source code |
| read_bdg | Source code |
| read_bedgraphs | Man page Source code |
| region_filter | Man page Source code |
| remove_snps | Man page Source code |
| remove_uncovered | Man page Source code |
| save_HDF5_methrix | Man page |
| subset_methrix | Man page Source code |
| write_bedgraphs | Man page Source code |
| write_bigwigs | Man page Source code |
