removeDups: Remove all but one occurences of a duplicated interaction
In ComputationalRegulatoryGenomicsICL/GenomicInteractions-new: Utilities for handling genomic interaction data
removeDups R Documentation
Remove all but one occurences of a duplicated interaction
Description
Removes all but the first occurence of a duplicated interaction (defined as
having identical coordinates for both anchors). N.B. this does not summarise
the total counts of all the duplicates. It is designed for removing potential
PCR duplicates after reading in .bam files.
Usage
removeDups(GIObject)
Arguments
GIObject
A GInteractions object.
Value
A GInteractions object that is a subset of the input object.
ComputationalRegulatoryGenomicsICL/GenomicInteractions-new documentation built on April 10, 2022, 5:39 p.m.
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| removeDups | R Documentation |
Remove all but one occurences of a duplicated interaction
Description
Removes all but the first occurence of a duplicated interaction (defined as having identical coordinates for both anchors). N.B. this does not summarise the total counts of all the duplicates. It is designed for removing potential PCR duplicates after reading in .bam files.
Usage
removeDups(GIObject)
Arguments
GIObject |
A GInteractions object. |
Value
A GInteractions object that is a subset of the input object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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