get_gene_score: Calculate gene specific score in both direction
In CostaLab/scMarkerDetect: Detect marker panel from scRNA-seq profile
get_gene_score R Documentation
Calculate gene specific score in both direction
Description
Calculate gene specific score in both direction
Usage
get_gene_score(
exprs.matrix,
celltype,
gene,
step = 0.01,
pseudo.count = 0.01,
min.tnr = 0.65
)
Arguments
exprs.matrix
exprs matrix with ident panel
gene
gene to use
step
quantile step
id
interested cell id
Value
gene score in both direction
CostaLab/scMarkerDetect documentation built on May 12, 2022, 6:05 a.m.
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| get_gene_score | R Documentation |
Calculate gene specific score in both direction
Description
Calculate gene specific score in both direction
Usage
get_gene_score( exprs.matrix, celltype, gene, step = 0.01, pseudo.count = 0.01, min.tnr = 0.65 )
Arguments
exprs.matrix |
exprs matrix with ident panel |
gene |
gene to use |
step |
quantile step |
id |
interested cell id |
Value
gene score in both direction
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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