findDuplicates: find duplicated odor names

In Dahaniel/glodatamix: GloDataMix

Description

checks 4 letter odor codes for duplications

Usage

findDuplicates(data.object, case = "upper", molsingle = F,
  usualsuspects = T, conc0 = T, cut.odors = F, conc.from.bc = F,
  conc.from.odor = F)

Arguments

data.object	input data in gloDatamix format
case	transform all to "upper", "lower" or "common" case, (common not implemented yet); or "test" only
molsingle	find misspelled MOL recordings (only for single recordings, DONT USE WITH TWINPAL), greps for "mol" and replaces all hits with "mol"
usualsuspects	correct for some ususal made misspellings like BJOT BIOT, ALOT AIOT
conc0	set NOConc for "AIR" and "MOL" to 0
cut.odors	remove everything beyond 4 letters from the odor names
conc.from.bc	read concentration from barcode – !!handle with care!!
conc.from.odor	read concentration from odorfield, assuming is is the last 2 digits – !!!handle with even more care!!!

Author(s)

Daniel M<c3><bc>nch <[e-mail]>

Dahaniel/glodatamix documentation built on May 6, 2019, 1:21 p.m.