analyze_behavior: This function returns the concentration derivative of each...

In DanielKneipp/DNAr: Simulates chemical reaction networks constructed with DNA

This function returns the concentration derivative of each species

Description

This function can be used for study what is impacting each species and how much. this is useful to analyse medium size (dozens of reactions) CRNs. all parameters follows the parameters of react(), except the optional time_point and behavior. If a time_point is passed, a behavior must be passed as well. If both parameters are set, this functions returns the concentration of each species at a specific point in time within the derivative.

Usage

analyze_behavior(species, ci, reactions, ki, time_points = NULL,
  behavior = NULL)

Arguments

time_points	A vector of indexes (representing multiple points in time) used for access lines of behavior.
behavior	The data returned by react().

Value

A data frame with the derivatives. To access the derivative of a species 'A', you just have to access df['A'].

DanielKneipp/DNAr documentation built on Jan. 7, 2023, 12:42 p.m.