define_neuron_gate_binding_hje: Get the binding between two neuron gates

In DanielKneipp/DNAr: Simulates chemical reaction networks constructed with DNA

Get the binding between two neuron gates

Description

This function returns a modified gate of gate2 input. this modified version has one of its input neurons binded to the output neuron of gate2.

Usage

define_neuron_gate_binding_hje(gate1, gate2, input_neuron_idx, ...)

Arguments

gate1, gate2	The gates which will be binded
input_neuron_idx	The index of the input neuron of gate2 which will be binded.
...	The parameters enzyme_config, ci and optionally bind_inhibitory, which will be passed to get_neuron_binding_hje()

Details

The binding is made using the function add_gate_binding_on_neuron_hje(). The binding is a list with the following structure:

• gate1_name, gate2_name: = gate 1 and 2 names, respectively;

• input_neuron_idx: the parameter input_neuron_idx,

• neuron_binding_crn: binding CRN returned by get_neuron_binding_hje()

Value

The gate2 received as input but with the specified input neuron binded to the gate1 output.

See Also

get_neuron_binding_hje() for details about the parameter that it s expecting.

DanielKneipp/DNAr documentation built on Jan. 7, 2023, 12:42 p.m.