API for DavidQuigley/HTDoseResponseCurve
Dose Response Curve Evaluation from Incucyte and Other High-Throughput Platforms
| Global functions | |
|---|---|
| AUC | Source code |
| AUC.HT_fit | Source code |
| AUC_across_timepoints | Source code |
| HT_fit | Source code |
| HT_fit_plot_colors | Source code |
| boxplot_label_outliers | Man page Source code |
| chou_synergy | Man page Source code |
| chou_synergy_CI_median | Man page Source code |
| chou_synergy_helper | Source code |
| color_scale | Source code |
| combine_data_and_map | Man page Source code |
| convert_dataset_for_synergy_DRC | Source code |
| convert_to_foldchange | Man page Source code |
| create_dataset | Man page Source code |
| create_empty_plate | Man page Source code |
| create_empty_plate_map | Man page Source code |
| create_synergy_dataset | Man page Source code |
| fit_DRC | Man page Source code |
| fit_DRC_synergy | Source code |
| fit_statistics | Man page Source code |
| fit_statistics_matrixes | Man page Source code |
| get.split.col | Source code |
| get_concentrations | Man page Source code |
| get_hours | Man page Source code |
| get_sample_types | Man page Source code |
| get_treatments | Man page Source code |
| hsh_from_vectors | Source code |
| hsh_get | Source code |
| hsh_in | Source code |
| hsh_new | Source code |
| hsh_set | Source code |
| is_dataset_valid | Source code |
| logtics | Source code |
| metric_to_grid | Man page Source code |
| normalize_by_vehicle | Source code |
| plate_dimensions_from_wells | Source code |
| plot.HT_fit | Man page Source code |
| plot_additive_vs_synergy_effect | Source code |
| plot_chou_synergy_Fa_CI | Man page Source code |
| plot_color_grid | Man page Source code |
| plot_fit_statistic | Man page Source code |
| plot_isobologram | Source code |
| plot_synergy_interaction_index | Man page Source code |
| plot_synergy_median_effect | Man page Source code |
| plot_timecourse | Source code |
| plot_timecourse_raw | Man page |
| plot_treatment_summary | Source code |
| plot_values_by_plate | Man page Source code |
| prepare_for_normalization | Source code |
| read_dataset | Man page Source code |
| read_platemap_from_Incucyte_XML | Man page Source code |
| read_platemap_from_excel | Man page Source code |
| read_plates_from_Incucyte_export | Man page Source code |
| se | Source code Source code |
| set_list_default | Source code |
| split_synergy_datasets_for_CI | Source code |
| standardize_treatment_assigments | Man page Source code |
| subset_treatments | Source code |
| summary.HT_fit | Man page Source code |
| synergy_bliss | Man page Source code |
| synergy_interaction_CI | Man page Source code |
| timecourse_AUC_ratio | Man page Source code |
| timecourse_relative_grid | Man page Source code |
| write.output | Source code |
| write_platemap_to_XML | Man page Source code |
