write_platemap_to_XML: Write a loaded plate map object in XML format

In DavidQuigley/HTDoseResponseCurve: Dose Response Curve Evaluation from Incucyte and Other High-Throughput Platforms

Description

Write a loaded plate map object in XML format

Usage

write_platemap_to_XML(fn, plate_map, passage, seeding_density, density_units,
  concentration_units)

Arguments

fn	A complete path to the file to write.
plate_map	A list with matrixes labeled concentration, treatment, and sample_type.
passage	Number for cell passage.
seeding_density	Number for seeding density.
density_units	Text string indicating the density units.
concentration_units	Text string indicating the treatment concentration units.

Value

none

Examples

pkg = "HTDoseResponseCurve"
fn_map = system.file("extdata", "sample_data_96_platemap.xlsx",package=pkg)
plate_map = read_platemap_from_excel( fn_map, number_of_wells=96 )
#write_platemap_to_XML( fn_map, plate_map, passage=1, seeding_density=1000,
#  density_units="thousands", concentration_units="ng/ul")

DavidQuigley/HTDoseResponseCurve documentation built on Jan. 23, 2021, 5:10 a.m.