ppi_union: Function to allow users to choose the union of stringdb and...
In DavisWeaver/crosstalkr: Analysis of Graph-Structured Data with a Focus on Protein-Protein Interaction Networks
ppi_union R Documentation
Function to allow users to choose the union of stringdb and biogrid
Only works with the human PPI. min_score parameter only applies to strindb
Description
Function to allow users to choose the union of stringdb and biogrid
Only works with the human PPI. min_score parameter only applies to strindb
Usage
ppi_union(cache = NULL, min_score = 0, edb = "default")
Arguments
cache
A filepath to a folder downloaded files should be stored
min_score
minimum connectivity score for each edge in the network.
edb
ensemble database object
Value
igraph object corresponding to PPI following union
DavisWeaver/crosstalkr documentation built on May 6, 2024, 6:09 p.m.
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| ppi_union | R Documentation |
Function to allow users to choose the union of stringdb and biogrid Only works with the human PPI. min_score parameter only applies to strindb
Description
Function to allow users to choose the union of stringdb and biogrid Only works with the human PPI. min_score parameter only applies to strindb
Usage
ppi_union(cache = NULL, min_score = 0, edb = "default")
Arguments
cache |
A filepath to a folder downloaded files should be stored |
min_score |
minimum connectivity score for each edge in the network. |
edb |
ensemble database object |
Value
igraph object corresponding to PPI following union
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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