DoHeatmap_my: heatmap of average expression, by cluster

In DawnEve/GEB: A R pkg to decorate Seurat output (single-cell RNA-seq tool)

heatmap of average expression, by cluster

Description

heatmap of average expression, by cluster

Usage

DoHeatmap_my(
  sce,
  features,
  slot = "scale.data",
  assay = "RNA",
  main = "",
  group.by = "seurat_clusters",
  rotate = F
)

Arguments

sce	Seurat obj
features	gene list
slot	which expression type
assay	assay
main	title

Examples

DoHeatmap_my(scObj_colon, gene_203307, group.by = 'sample')
DoHeatmap_my(scObj_colon, gene_203307, group.by = 'sample', rotate=T)

DawnEve/GEB documentation built on July 6, 2022, 7:05 p.m.