Files in DistanceDevelopment/mrds
Mark-Recapture Distance Sampling

.Rbuildignore

.github/workflows/rhub.yaml

.github/workflows/test-coverage.yaml

.github/workflows/testmrds.yml

.gitignore

.travis.yml

Clarity.txt

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/AIC.R R/DeltaMethod.R R/NCovered.R R/NCovered.ds.R R/NCovered.io.R R/NCovered.io.fi.R R/NCovered.rem.R R/NCovered.rem.fi.R R/NCovered.trial.R R/NCovered.trial.fi.R R/add.df.covar.line.R R/adj.check.order.R R/adj.cos.R R/adj.herm.R R/adj.poly.R R/adj.series.grad.cos.R R/adj.series.grad.herm.R R/adj.series.grad.poly.R R/adjfct.cos.R R/adjfct.herm.R R/adjfct.poly.R R/apex.gamma.R R/assign.default.values.R R/assign.par.R R/average.line.R R/average.line.cond.R R/calc.se.Np.R R/cdf.ds.R R/cds.R R/check.bounds.R R/check.mono.R R/coef.ds.R R/coef.io.R R/coef.io.fi.R R/coef.rem.R R/coef.rem.fi.R R/coef.trial.R R/coef.trial.fi.R R/compute.Nht.R R/covered.region.dht.R R/create.bins.R R/create.ddfobj.R R/create.model.frame.R R/create.varstructure.R R/ddf.R R/ddf.ds.R R/ddf.gof.R R/ddf.io.R R/ddf.io.fi.R R/ddf.rem.R R/ddf.rem.fi.R R/ddf.trial.R R/ddf.trial.fi.R R/det.tables.R R/detfct.R R/detfct.fit.R R/detfct.fit.mono.R R/detfct.fit.opt.R R/dht.R R/dht.deriv.R R/dht.se.R R/distpdf.grad.R R/ds.function.r R/fixform.R R/flnl.R R/flnl.constr.grad.R R/flnl.grad.R R/flpt.lnl.r R/flt.var.R R/g0.R R/getpar.R R/gof.ds.R R/gof.io.R R/gof.io.fi.R R/gof.pvalues.R R/gof.rem.R R/gof.rem.fi.R R/gof.trial.R R/gof.trial.fi.R R/gstdint.R R/hermite.poly.R R/histline.R R/integratedetfct.logistic.R R/integratelogistic.R R/integratelogistic.analytic.R R/integratelogisticdup.R R/integratepdf.grad.R R/integratepdf.r R/io.glm.R R/is.linear.logistic.R R/is.logistic.constant.R R/keyfct.gamma.R R/keyfct.grad.hn.R R/keyfct.grad.hz.R R/keyfct.hn.R R/keyfct.hz.R R/keyfct.th.R R/keyfct.tpn.R R/logLik.R R/logisticbyx.R R/logisticbyz.R R/logisticdetfct.R R/logisticdupbyx.R R/logisticdupbyx_fast.R R/logit.R R/mcds.R R/mcds_tools.R R/model.description.R R/mrds-package.R R/nlminb_wrapper.R R/optimx.setup.R R/p.det.R R/p.dist.table.R R/parse.optimx.R R/pcramer.R R/pdot.dsr.integrate.logistic.R R/plot.det.tables.R R/plot.ds.R R/plot.io.R R/plot.io.fi.R R/plot.rem.R R/plot.rem.fi.R R/plot.trial.R R/plot.trial.fi.R R/plot_cond.R R/plot_layout.R R/plot_uncond.R R/predict.ds.R R/predict.io.R R/predict.io.fi.R R/predict.rem.R R/predict.rem.fi.R R/predict.trial.R R/predict.trial.fi.R R/print.ddf.R R/print.ddf.gof.R R/print.det.tables.R R/print.dht.R R/print.summary.ds.R R/print.summary.io.R R/print.summary.io.fi.R R/print.summary.rem.R R/print.summary.rem.fi.R R/print.summary.trial.R R/print.summary.trial.fi.R R/prob.deriv.R R/prob.se.R R/process.data.R R/qqplot.ddf.R R/rem.glm.R R/rescale_pars.R R/rtriangle.r R/sample_ddf.R R/scalecheck.R R/scalevalue.R R/setbounds.R R/setcov.R R/sethazard.R R/setinitial.ds.R R/sim.mix.R R/solvecov.R R/summary.ds.R R/summary.io.R R/summary.io.fi.R R/summary.rem.R R/summary.rem.fi.R R/summary.trial.R R/summary.trial.fi.R R/survey.region.dht.R R/test.breaks.R R/varn.R R/zzz.R README.md

_pkgdown.yml

data/book.tee.data.rda

data/lfbcvi.rda

data/lfgcwa.rda

data/pronghorn.rda

data/ptdata.distance.rda

data/ptdata.dual.rda

data/ptdata.removal.rda

data/ptdata.single.rda

data/stake77.rda

data/stake78.rda

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inst/ONEWS

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inst/testData/ltexample.rda

inst/testData/ltresults.rda

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man/AIC.ddf.Rd man/DeltaMethod.Rd man/NCovered.Rd man/add.df.covar.line.Rd man/adj.check.order.Rd man/adj.cos.Rd man/adj.herm.Rd man/adj.poly.Rd man/adj.series.grad.cos.Rd man/adj.series.grad.herm.Rd man/adj.series.grad.poly.Rd man/apex.gamma.Rd man/assign.default.values.Rd man/assign.par.Rd man/average.line.Rd man/average.line.cond.Rd man/book.tee.data.Rd man/calc.se.Np.Rd man/cdf.ds.Rd man/cds.Rd man/check.bounds.Rd man/check.mono.Rd man/coef.ds.Rd man/compute.Nht.Rd man/covered.region.dht.Rd man/create.bins.Rd man/create.command.file.Rd man/create.ddfobj.Rd man/create.model.frame.Rd man/create.varstructure.Rd man/ddf.Rd man/ddf.ds.Rd man/ddf.gof.Rd man/ddf.io.Rd man/ddf.io.fi.Rd man/ddf.rem.Rd man/ddf.rem.fi.Rd man/ddf.trial.Rd man/ddf.trial.fi.Rd man/det.tables.Rd man/detfct.fit.Rd man/detfct.fit.opt.Rd man/dht.Rd man/dht.deriv.Rd man/dht.se.Rd man/distpdf.Rd man/distpdf.grad.Rd man/ds.function.Rd man/flnl.Rd man/flnl.constr.grad.neg.Rd man/flnl.grad.Rd man/flt.var.Rd man/g0.Rd man/getpar.Rd man/gof.ds.Rd man/gstdint.Rd man/histline.Rd man/integratedetfct.logistic.Rd man/integratelogistic.analytic.Rd man/integratepdf.Rd man/integratepdf.grad.Rd man/io.glm.Rd man/is.linear.logistic.Rd man/is.logistic.constant.Rd man/keyfct.grad.hn.Rd man/keyfct.grad.hz.Rd man/keyfct.th1.Rd man/keyfct.th2.Rd man/keyfct.tpn.Rd man/lfbcvi.Rd man/lfgcwa.Rd man/logLik.ddf.Rd man/logisticbyx.Rd man/logisticbyz.Rd man/logisticdetfct.Rd man/logisticdupbyx.Rd man/logisticdupbyx_fast.Rd man/logit.Rd man/mcds.Rd man/mcds_dot_exe.Rd man/mrds-package.Rd man/mrds_opt.Rd man/nlminb_wrapper.Rd man/p.det.Rd man/p.dist.table.Rd man/parse.optimx.Rd man/pdot.dsr.integrate.logistic.Rd man/plot.det.tables.Rd man/plot.ds.Rd man/plot.io.Rd man/plot.io.fi.Rd man/plot.rem.Rd man/plot.rem.fi.Rd man/plot.trial.Rd man/plot.trial.fi.Rd man/plot_cond.Rd man/plot_layout.Rd man/plot_uncond.Rd man/predict.ds.Rd man/print.ddf.Rd man/print.ddf.gof.Rd man/print.det.tables.Rd man/print.dht.Rd man/print.p_dist_table.Rd man/print.summary.ds.Rd man/print.summary.io.Rd man/print.summary.io.fi.Rd man/print.summary.rem.Rd man/print.summary.rem.fi.Rd man/print.summary.trial.Rd man/print.summary.trial.fi.Rd man/prob.deriv.Rd man/prob.se.Rd man/process.data.Rd man/pronghorn.Rd man/ptdata.distance.Rd man/ptdata.dual.Rd man/ptdata.removal.Rd man/ptdata.single.Rd man/qqplot.ddf.Rd man/rem.glm.Rd man/rescale_pars.Rd man/sample_ddf.Rd man/setbounds.Rd man/setcov.Rd man/setinitial.ds.Rd man/sim.mix.Rd man/solvecov.Rd man/stake77.Rd man/stake78.Rd man/summary.ds.Rd man/summary.io.Rd man/summary.io.fi.Rd man/summary.rem.Rd man/summary.rem.fi.Rd man/summary.trial.Rd man/summary.trial.fi.Rd man/survey.region.dht.Rd man/test.breaks.Rd man/varn.Rd tests/testthat.R tests/testthat/test_batman.R tests/testthat/test_bugs.R tests/testthat/test_dht.R tests/testthat/test_easy.R tests/testthat/test_input.R tests/testthat/test_mono.R tests/testthat/test_nosightings.R tests/testthat/test_predict.R tests/testthat/test_trial.R

vignettes/apa.csl

vignettes/golftees.bib

vignettes/mrds-golftees.Rmd

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