Djeppschmidt/Model.Microbiome
Environment And Community Simulation Package

Package index
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Djeppschmidt/Model.Microbiome: Environment And Community Simulation Package
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API

API for Djeppschmidt/Model.Microbiome
Environment And Community Simulation Package

Global functions
BENCHMARK.MM Man page Source code
ConnStat Man page Source code
DMI Man page Source code
Delta.sppcount Man page Source code
LII Man page Source code
QSeq Man page Source code
RA Man page Source code
SVI Man page Source code
SVI2 Man page Source code
Summarize.Ftable Man page Source code
Summarize.LII Man page Source code
Summarize.PERMANOVA.Rratio Man page Source code
Summarize.lmRatiotab.Mean Man page Source code
Summarize.lmRatiotab.Var Man page Source code
Summarize.lmRatiotabModel.Mean Man page Source code
Summarize.lmRatiotabModel.Var Man page Source code
bias Source code
compete Man page Source code Source code
data_summary Man page Source code
data_summary2 Man page Source code
deseq.res Man page Source code
deseqIndics Man page Source code
deseqVST Man page Source code
div Man page Source code
eRare Man page Source code
ext.DMI Man page Source code
ext.LII Man page Source code
ext.PERMANOVA Man page Source code
ext.RI Man page Source code
filter.limma Man page Source code
getNetPlot Man page Source code
getNetStats Man page Source code
getTaxCor.Tab Man page Source code
getmode Man page Source code Source code
gm_mean Man page Source code
hmsc.model Source code
indicspp Man page Source code
indicsummary Man page Source code
limma.Indics Man page Source code
limma.Indics3 Man page Source code
limmaVST Man page Source code
lm.model Man page Source code
lm.model2 Man page Source code
lm.test Man page Source code
make.PERMANOVA Man page Source code
make.comm Man page Source code
make.comm2 Man page Source code
make.deseqVST Man page Source code
make.guildtab Man page Source code Source code
make.limmaVST Man page Source code
make.rarefy1 Man page Source code
make.rarefy2 Man page Source code
make.refcomm Man page Source code
make.scaled2 Man page Source code
make.table Man page Source code
make.table2 Man page Source code
model.rarefy Man page Source code
pRare Man page Source code
run.LII Man page Source code
run.PERMANOVA Man page Source code
run.analysis2 Man page Source code
run.analysis3 Man page Source code
run.bias Source code
run.compete Man page Source code Source code
run.rarecurve Man page Source code
set.seqDepth Man page Source code
simulate.MM Man page Source code
spike1 Man page Source code
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spike3 Man page Source code
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tree Source code
Djeppschmidt/Model.Microbiome documentation built on Sept. 17, 2022, 9:15 p.m.

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