Files in Djeppschmidt/Model.Microbiome

Environment And Community Simulation Package

Output_Map.pdf R/Functions.R R/HmscModeldev.R README.md Tutorial.Rmd Untitled.Rmd man/BENCHMARK.MM.Rd man/ConnStat.Rd man/DMI.Rd man/Delta.sppcount.Rd man/LII.Rd man/QSeq.Rd man/RA.Rd man/SVI.Rd man/SVI2.Rd man/Summarize.Ftable.Rd man/Summarize.LII.Rd man/Summarize.PERMANOVA.Rratio.Rd man/Summarize.lmRatiotab.Mean.Rd man/Summarize.lmRatiotab.Var.Rd man/Summarize.lmRatiotabModel.Mean.Rd man/Summarize.lmRatiotabModel.Var.Rd man/compete.Rd man/data_summary.Rd man/data_summary2.Rd man/deseq.res.Rd man/deseqIndics.Rd man/deseqVST.Rd man/div.Rd man/eRare.Rd man/ext.DMI.Rd man/ext.LII.Rd man/ext.PERMANOVA.Rd man/ext.RI.Rd man/filter.limma.Rd man/getNetPlot.Rd man/getNetStats.Rd man/getTaxCor.Tab.Rd man/getmode.Rd man/gm_mean.Rd man/indicspp.Rd man/indicsummary.Rd man/limma.Indics.Rd man/limma.Indics3.Rd man/limmaVST.Rd man/lm.model.Rd man/lm.model2.Rd man/lm.test.Rd man/make.PERMANOVA.Rd man/make.comm.Rd man/make.comm2.Rd man/make.deseqVST.Rd man/make.guildtab.Rd man/make.limmaVST.Rd man/make.rarefy1.Rd man/make.rarefy2.Rd man/make.refcomm.Rd man/make.scaled2.Rd man/make.table.Rd man/make.table2.Rd man/model.rarefy.Rd man/pRare.Rd man/run.LII.Rd man/run.PERMANOVA.Rd man/run.analysis2.Rd man/run.analysis3.Rd man/run.compete.Rd man/run.rarecurve.Rd man/set.seqDepth.Rd man/simulate.MM.Rd man/spike1.Rd man/spike2.Rd man/spike3.Rd man/spp1.Rd man/spp10.Rd man/spp100.Rd man/spp101.Rd man/spp102.Rd man/spp103.Rd man/spp104.Rd man/spp105.Rd man/spp106.Rd man/spp107.Rd man/spp108.Rd man/spp109.Rd man/spp11.Rd man/spp110.Rd man/spp111.Rd man/spp112.Rd man/spp113.Rd man/spp114.Rd man/spp115.Rd man/spp116.Rd man/spp117.Rd man/spp118.Rd man/spp119.Rd man/spp12.Rd man/spp120.Rd man/spp121.Rd man/spp122.Rd man/spp123.Rd man/spp124.Rd man/spp125.Rd man/spp126.Rd man/spp127.Rd man/spp128.Rd man/spp129.Rd man/spp13.Rd man/spp130.Rd man/spp131.Rd man/spp132.Rd man/spp133.Rd man/spp134.Rd man/spp135.Rd man/spp136.Rd man/spp137.Rd man/spp138.Rd man/spp139.Rd man/spp14.Rd man/spp140.Rd 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man/spp271.Rd man/spp272.Rd man/spp273.Rd man/spp274.Rd man/spp275.Rd man/spp276.Rd man/spp277.Rd man/spp278.Rd man/spp279.Rd man/spp28.Rd man/spp280.Rd man/spp281.Rd man/spp282.Rd man/spp283.Rd man/spp284.Rd man/spp285.Rd man/spp286.Rd man/spp287.Rd man/spp288.Rd man/spp289.Rd man/spp29.Rd man/spp290.Rd man/spp291.Rd man/spp292.Rd man/spp293.Rd man/spp294.Rd man/spp295.Rd man/spp296.Rd man/spp297.Rd man/spp298.Rd man/spp299.Rd man/spp3.Rd man/spp30.Rd man/spp300.Rd man/spp301.Rd man/spp302.Rd man/spp303.Rd man/spp304.Rd man/spp305.Rd man/spp306.Rd man/spp307.Rd man/spp308.Rd man/spp309.Rd man/spp31.Rd man/spp310.Rd man/spp311.Rd man/spp312.Rd man/spp313.Rd man/spp314.Rd man/spp315.Rd man/spp316.Rd man/spp317.Rd man/spp318.Rd man/spp319.Rd man/spp32.Rd man/spp320.Rd man/spp321.Rd man/spp322.Rd man/spp323.Rd man/spp324.Rd man/spp325.Rd man/spp326.Rd man/spp327.Rd man/spp328.Rd man/spp329.Rd man/spp33.Rd man/spp330.Rd man/spp331.Rd man/spp332.Rd man/spp333.Rd man/spp334.Rd man/spp335.Rd man/spp336.Rd man/spp337.Rd man/spp338.Rd man/spp339.Rd man/spp34.Rd man/spp340.Rd man/spp341.Rd man/spp342.Rd man/spp343.Rd man/spp344.Rd man/spp345.Rd man/spp346.Rd man/spp347.Rd man/spp348.Rd man/spp349.Rd man/spp35.Rd man/spp350.Rd man/spp351.Rd man/spp352.Rd man/spp353.Rd man/spp354.Rd man/spp355.Rd man/spp356.Rd man/spp357.Rd man/spp358.Rd man/spp359.Rd man/spp36.Rd man/spp360.Rd man/spp361.Rd man/spp362.Rd man/spp363.Rd man/spp364.Rd man/spp365.Rd man/spp366.Rd man/spp367.Rd man/spp368.Rd man/spp369.Rd man/spp37.Rd man/spp370.Rd man/spp371.Rd man/spp372.Rd man/spp373.Rd man/spp374.Rd man/spp375.Rd man/spp376.Rd man/spp377.Rd man/spp378.Rd man/spp379.Rd man/spp38.Rd man/spp380.Rd man/spp381.Rd man/spp382.Rd man/spp383.Rd man/spp384.Rd man/spp385.Rd man/spp386.Rd man/spp387.Rd man/spp388.Rd man/spp389.Rd man/spp39.Rd man/spp390.Rd man/spp391.Rd man/spp392.Rd man/spp393.Rd man/spp394.Rd man/spp395.Rd man/spp396.Rd man/spp397.Rd man/spp398.Rd man/spp399.Rd man/spp4.Rd man/spp40.Rd man/spp400.Rd man/spp401.Rd man/spp402.Rd man/spp403.Rd man/spp404.Rd man/spp405.Rd man/spp406.Rd man/spp407.Rd man/spp408.Rd man/spp409.Rd man/spp41.Rd man/spp410.Rd man/spp411.Rd man/spp412.Rd man/spp413.Rd man/spp414.Rd man/spp415.Rd man/spp416.Rd man/spp417.Rd man/spp418.Rd man/spp419.Rd man/spp42.Rd man/spp420.Rd man/spp421.Rd man/spp422.Rd man/spp423.Rd man/spp424.Rd man/spp425.Rd man/spp426.Rd man/spp427.Rd man/spp428.Rd man/spp429.Rd man/spp43.Rd man/spp430.Rd man/spp431.Rd man/spp432.Rd man/spp433.Rd man/spp434.Rd man/spp435.Rd man/spp436.Rd man/spp437.Rd man/spp438.Rd man/spp439.Rd man/spp44.Rd man/spp440.Rd man/spp441.Rd man/spp442.Rd man/spp443.Rd man/spp444.Rd man/spp445.Rd man/spp446.Rd man/spp447.Rd man/spp448.Rd man/spp449.Rd man/spp45.Rd man/spp450.Rd man/spp451.Rd man/spp452.Rd man/spp453.Rd man/spp454.Rd man/spp455.Rd man/spp456.Rd man/spp457.Rd man/spp458.Rd man/spp459.Rd man/spp46.Rd man/spp460.Rd man/spp461.Rd man/spp462.Rd man/spp463.Rd man/spp464.Rd man/spp465.Rd man/spp466.Rd man/spp467.Rd man/spp468.Rd man/spp469.Rd man/spp47.Rd man/spp470.Rd man/spp471.Rd man/spp472.Rd man/spp473.Rd man/spp474.Rd man/spp475.Rd man/spp476.Rd man/spp477.Rd man/spp478.Rd man/spp479.Rd man/spp48.Rd man/spp480.Rd man/spp481.Rd man/spp482.Rd man/spp483.Rd man/spp484.Rd man/spp485.Rd man/spp486.Rd man/spp487.Rd man/spp488.Rd man/spp489.Rd man/spp49.Rd man/spp490.Rd man/spp491.Rd man/spp492.Rd man/spp493.Rd man/spp494.Rd man/spp495.Rd man/spp496.Rd man/spp497.Rd man/spp498.Rd man/spp499.Rd man/spp5.Rd man/spp50.Rd man/spp500.Rd man/spp501.Rd man/spp502.Rd man/spp503.Rd man/spp504.Rd man/spp505.Rd man/spp506.Rd man/spp507.Rd man/spp508.Rd man/spp509.Rd man/spp51.Rd man/spp510.Rd man/spp511.Rd man/spp512.Rd man/spp513.Rd man/spp514.Rd man/spp515.Rd man/spp516.Rd man/spp517.Rd man/spp518.Rd man/spp519.Rd man/spp52.Rd man/spp520.Rd man/spp521.Rd man/spp522.Rd man/spp523.Rd man/spp524.Rd man/spp525.Rd man/spp526.Rd man/spp527.Rd man/spp528.Rd man/spp529.Rd man/spp53.Rd man/spp530.Rd man/spp531.Rd man/spp532.Rd man/spp533.Rd man/spp534.Rd man/spp535.Rd man/spp536.Rd man/spp537.Rd man/spp538.Rd man/spp539.Rd man/spp54.Rd man/spp540.Rd man/spp541.Rd man/spp542.Rd man/spp543.Rd man/spp544.Rd man/spp545.Rd man/spp546.Rd man/spp547.Rd man/spp548.Rd man/spp549.Rd man/spp55.Rd man/spp550.Rd man/spp551.Rd man/spp552.Rd man/spp553.Rd man/spp554.Rd man/spp555.Rd man/spp556.Rd man/spp557.Rd man/spp558.Rd man/spp559.Rd man/spp56.Rd man/spp560.Rd man/spp561.Rd man/spp562.Rd man/spp563.Rd man/spp564.Rd man/spp565.Rd man/spp566.Rd man/spp567.Rd man/spp568.Rd man/spp569.Rd man/spp57.Rd man/spp570.Rd man/spp571.Rd man/spp572.Rd man/spp573.Rd man/spp574.Rd man/spp575.Rd man/spp576.Rd man/spp577.Rd man/spp578.Rd man/spp579.Rd man/spp58.Rd man/spp580.Rd man/spp581.Rd man/spp582.Rd man/spp583.Rd man/spp584.Rd man/spp585.Rd man/spp586.Rd man/spp587.Rd man/spp588.Rd man/spp589.Rd man/spp59.Rd man/spp590.Rd man/spp591.Rd man/spp592.Rd man/spp593.Rd man/spp594.Rd man/spp595.Rd man/spp596.Rd man/spp597.Rd man/spp598.Rd man/spp599.Rd man/spp6.Rd man/spp60.Rd man/spp600.Rd man/spp601.Rd man/spp602.Rd man/spp603.Rd man/spp604.Rd man/spp605.Rd man/spp606.Rd man/spp607.Rd man/spp608.Rd man/spp609.Rd man/spp61.Rd man/spp610.Rd man/spp611.Rd man/spp612.Rd man/spp613.Rd man/spp614.Rd man/spp615.Rd man/spp616.Rd man/spp617.Rd man/spp618.Rd man/spp619.Rd man/spp62.Rd man/spp620.Rd man/spp621.Rd man/spp622.Rd man/spp623.Rd man/spp624.Rd man/spp625.Rd man/spp626.Rd man/spp627.Rd man/spp628.Rd man/spp629.Rd man/spp63.Rd man/spp630.Rd man/spp631.Rd man/spp632.Rd man/spp633.Rd man/spp634.Rd man/spp635.Rd man/spp636.Rd man/spp637.Rd man/spp638.Rd man/spp639.Rd man/spp64.Rd man/spp640.Rd man/spp641.Rd man/spp642.Rd man/spp643.Rd man/spp644.Rd man/spp645.Rd man/spp646.Rd man/spp647.Rd man/spp648.Rd man/spp649.Rd man/spp65.Rd man/spp650.Rd man/spp651.Rd man/spp652.Rd man/spp653.Rd man/spp654.Rd man/spp655.Rd man/spp656.Rd man/spp657.Rd man/spp658.Rd man/spp659.Rd man/spp66.Rd man/spp660.Rd man/spp661.Rd man/spp662.Rd man/spp663.Rd man/spp664.Rd man/spp665.Rd man/spp666.Rd man/spp667.Rd man/spp668.Rd man/spp669.Rd man/spp67.Rd man/spp670.Rd man/spp671.Rd man/spp672.Rd man/spp673.Rd man/spp674.Rd man/spp675.Rd man/spp676.Rd man/spp677.Rd man/spp678.Rd man/spp679.Rd man/spp68.Rd man/spp680.Rd man/spp681.Rd man/spp682.Rd man/spp683.Rd man/spp684.Rd man/spp685.Rd man/spp686.Rd man/spp687.Rd man/spp688.Rd man/spp689.Rd man/spp69.Rd man/spp690.Rd man/spp691.Rd man/spp692.Rd man/spp693.Rd man/spp694.Rd man/spp695.Rd man/spp696.Rd man/spp697.Rd man/spp698.Rd man/spp699.Rd man/spp7.Rd man/spp70.Rd man/spp700.Rd man/spp71.Rd man/spp72.Rd man/spp73.Rd man/spp74.Rd man/spp75.Rd man/spp76.Rd man/spp77.Rd man/spp78.Rd man/spp79.Rd man/spp8.Rd man/spp80.Rd man/spp81.Rd man/spp82.Rd man/spp83.Rd man/spp84.Rd man/spp85.Rd man/spp86.Rd man/spp87.Rd man/spp88.Rd man/spp89.Rd man/spp9.Rd man/spp90.Rd man/spp91.Rd man/spp92.Rd man/spp93.Rd man/spp94.Rd man/spp95.Rd 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