getNodeStats: Get node statistics
In DomBennett/MoreTreeTools: Tools for manipulating phylogenetic trees
Description
Usage
Arguments
Details
References
Examples
Description
Return dataframe of number of children, age and
previous connecting node of every node in tree.
Usage
1
getNodeStats(tree, nodes = "all", ignore.tips = NULL)
Arguments
tree
phylogenetic tree (ape class)
nodes
numeric vector of nodes, default 'all'
ignore.tips
tips to ignore when counting, default NULL
Details
Assumes tree is rooted, bifurcating and time callibrated.
Use ignore.tips to specify tips of tree to ignore when counting
children.
References
No references yet!
https://github.com/DomBennett/MoreTreeTools.
Examples
1
2
tree <- rtree (100)
node.stats <- getNodeStats (tree)
DomBennett/MoreTreeTools documentation built on May 6, 2019, 2:51 p.m.
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Description Usage Arguments Details References Examples
Description
Return dataframe of number of children, age and previous connecting node of every node in tree.
Usage
1 | getNodeStats(tree, nodes = "all", ignore.tips = NULL)
|
Arguments
tree |
phylogenetic tree (ape class) |
nodes |
numeric vector of nodes, default 'all' |
ignore.tips |
tips to ignore when counting, default NULL |
Details
Assumes tree is rooted, bifurcating and time callibrated.
Use ignore.tips to specify tips of tree to ignore when counting children.
References
No references yet! https://github.com/DomBennett/MoreTreeTools.
Examples
1 2 | tree <- rtree (100)
node.stats <- getNodeStats (tree)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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