DomBennett/treeman
Phylogenetic Tree Manipulation Class and Methods

Package index
Search the DomBennett/treeman package
Vignettes
Functions
236
Source code
51
Man pages
93
Home
/
GitHub
/
DomBennett/treeman
/
getSubtree: Get subtree

getSubtree: Get subtree
In DomBennett/treeman: Phylogenetic Tree Manipulation Class and Methods

Description Usage Arguments Details See Also Examples

View source: R/get-spcl-methods.R

Description

Return tree descending from id.

Usage

1
getSubtree(tree, id)

Arguments

tree

TreeMan object

id

node id

Details

Returns a TreeMan, parallelizable. id must be an internal node.

See Also

getPrnt, addClade, https://github.com/DomBennett/treeman/wiki/get-methods

Examples

1
2
3
4
5
6
library(treeman)
data(mammals)
# get tree of apes
ape_id <- getPrnt(mammals, ids=c('Homo_sapiens', 'Hylobates_concolor'))
apes <- getSubtree(mammals, id=ape_id)
summary(apes)

DomBennett/treeman documentation built on Nov. 12, 2020, 1:35 p.m.

Related to getSubtree in DomBennett/treeman...

DomBennett/treeman index
README.md

R Package Documentation

rdrr.io home R language documentation Run R code online

Browse R Packages

CRAN packages Bioconductor packages R-Forge packages GitHub packages

We want your feedback!

Note that we can't provide technical support on individual packages. You should contact the package authors for that.
GitHub issue tracker
ian@mutexlabs.com
Personal blog

 
Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.

Close