Description Usage Arguments Value Author(s) References Examples
View source: R/custom.sim.cell.expr.R
Called from a user wrapper script (see example 'lrcde.wrapper.sims.R').
1 2 | custom.sim.cell.expr(num.cells = 5, base.expr.vec, diff.2.model.vec, cell.p,
len.mse.vec)
|
num.cells |
Number of cell types to simulate. |
base.expr.vec |
Control group expression level to simulate at the cell type-specific level. |
diff.2.model.vec |
Absolute difference between control group and cases group to simulate at the cell type-specific level. |
cell.p |
Number of cell type to alter between controls and cases for simulation purposes. |
len.mse.vec |
Total length of the MSE vector (used to calculate needed number of repeats of permutations of base and difference.) |
cell.expr Cell expressions matrix.
Edmund R Glass, Edmund.Glass@gmail.com
https://github.com/ERGlass/lrcde.dev
1 | custom.sim.cell.expr( num.cells.2.simulate, base.expression.vector, difference.2.simulate.vector, cell.2.modify, len.mse.vec )
|
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