het.from.synthetic: het.from.synthetic

In ERGlass/lrcde.dev: Linear Regression Cell Type-Specific Differential Expression Power Analysis

Description

Called from sim_driver_script.

Usage

het.from.synthetic(cell.props, cell.expr, resids, groups)

Arguments

cell.props	Should be samples by cell types (rows by columns). The relative cell proportions per sample.
cell.expr	Matrix of simulated cell type-specific expressions (returned from sim.cell.expr()).
resids	The simulated residuals returned from get.resids.synthetic().
groups	Vector of 1's and 2's indicating group membership (controls and cases).

Value

het.obs The simulated samples by genomic sites heterogeneous observations matrix with simulated residuals applied.

Author(s)

Edmund R Glass, [e-mail]

References

https://github.com/ERGlass/lrcde.dev

Examples

het.from.synthetic( cell.props, simulated.cell.expression, simulated.residuals, groups )

ERGlass/lrcde.dev documentation built on May 6, 2019, 3:09 p.m.