API for ETHZ-INS/scanMiR
scanMiR
| Global functions | |
|---|---|
| .TDMD | Source code |
| .add8merN | Source code |
| .aggregateSiteInfo | Source code |
| .aggregate_miRNA | Source code |
| .build4mersRegEx | Source code |
| .check3pParams | Source code |
| .checkSeedsInput | Source code |
| .conservation_levels | Source code |
| .default3pSubMatrix | Source code |
| .defaultAggParams | Source code |
| .find1SeedMatches | Source code |
| .flankingValues | Source code |
| .getFlankingScore | Source code |
| .gr2matchTable | Source code |
| .guessSeqType | Source code |
| .isWobble | Source code |
| .matchLevels | Source code |
| .matchStrings | Source code |
| .prep12mers | Source code |
| .prepSeqs | Source code |
| .typeColors | Source code |
| .unlistGRL | Source code |
| KdModel | Man page |
| KdModel-class | Man page |
| KdModel-methods | Man page |
| KdModelList | Man page Source code |
| KdModelList-class | Man page |
| KdModelList-methods | Man page |
| KdModelList-methods,KdModelList-method | Man page |
| SampleKdModel | Man page |
| SampleTranscript | Man page |
| [,KdModelList,ANY-method | Man page |
| [,KdModelList-methods,KdModelList-method | Man page |
| aggregateMatches | Man page Source code |
| assignKdType | Man page Source code |
| c,KdModel-method | Man page |
| conservation | Man page Source code |
| dummyKdData | Man page Source code |
| findSeedMatches | Man page Source code |
| get3pAlignment | Man page Source code |
| get8merRange | Man page Source code |
| getKdModel | Man page Source code |
| getKmers | Man page Source code |
| getMatchTypes | Man page Source code |
| getRandomSeq | Man page Source code |
| getSeed8mers | Man page Source code |
| plotKdModel | Man page Source code |
| removeOverlappingRanges | Man page Source code |
| show,KdModel-method | Man page |
| summary,KdModel-method | Man page |
| summary,KdModelList-method | Man page |
| viewTargetAlignment | Man page Source code |
