Files in EcoFoG/ForestData
Post-inventory processing of forest plot data

.#Extra/Elie/forestDataBasalArea.R .#Extra/Elie/forestDataClear.R .#Extra/Elie/forestDataMap.R .#Extra/Elie/functions.R .#Extra/OriginalCode/LisezMoi.Rmd
.#Extra/OriginalCode/LisezMoi.html
.#Extra/OriginalCode/ReadMe.txt
.#Extra/OriginalCode/add_missing.R .#Extra/OriginalCode/cleaning_dataV1.0.R .#Extra/OriginalCode/correctionsV1.0.R .#Extra/OriginalCode/dbh_correction.R .#Extra/OriginalCode/dbh_correction_1.R .#Extra/OriginalCode/gather.R .#Extra/OriginalCode/opening_and_correcting_data.R .#Extra/OriginalCode/overgrown_recruits.R .#Extra/OriginalCode/plot_corr.R .#Extra/OriginalCode/repl_missing.R .#Extra/OriginalCode/threshold.R .#Extra/OriginalCode/tree_status.R .#Extra/code profiling/compute_ba_profile.R .#Extra/code profiling/correct_alive_profile.R
.#Extra/current_corrections/Elie/_Rhistory
.#Extra/current_corrections/LisezMoi.Rmd
.#Extra/current_corrections/LisezMoi.html
.#Extra/current_corrections/ReadMe.txt
.#Extra/current_corrections/cleaning_dataV1.0.R .#Extra/current_corrections/cleaning_data_20180629.R .#Extra/current_corrections/correctionsV1.0.R .#Extra/current_corrections/correctionsV4.0.r .#Extra/deprec/Elie/forestDataBasalArea.R .#Extra/deprec/Elie/forestDataClear.R .#Extra/deprec/Elie/forestDataMap.R .#Extra/deprec/Elie/functions.R .#Extra/deprec/code_profiling/benchmark_correct_alive.R .#Extra/deprec/code_profiling/compute_ba_profile.R .#Extra/deprec/code_profiling/correct_alive_profile.R .#Extra/deprec/compute_ba.R .#Extra/deprec/compute_growth.R .#Extra/deprec/correct_alive.R .#Extra/deprec/correct_alive_1.R .#Extra/deprec/correct_alive_opti.R .#Extra/deprec/correct_size.R .#Extra/deprec/correct_size_2.R .#Extra/deprec/correct_size_last.R .#Extra/deprec/data.R .#Extra/deprec/mortality_by.R .#Extra/deprec2/code_profiling/benchmark_correct_alive.R .#Extra/deprec2/code_profiling/correct_alive_profile.R .#Extra/deprec2/data.R .#Extra/metadata.pdf
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
ForestData.Rproj
LICENSE
NAMESPACE
R/Project.R
R/_Rhistory
R/aggregate_growth.R R/check_rename_variable_col.R
R/compute_all.R
R/compute_ba.R R/compute_growth_fin.R R/compute_mortality.R R/compute_rates.R R/compute_recruitment.R R/correct_alive.R R/correct_all.R R/correct_recruits.R R/correct_size_main.R R/display_ba.R R/display_corrected_sizes.R R/display_growth.R R/display_mortality.R R/display_rates.R R/display_recruitment.R R/mortality_by.R R/reconstitute_POM.R R/utils_display.R README.md
_Rhistory
_gitignore.txt
_travis.yml
data/example_alive.csv
data/example_alive.rda
data/example_alive_mini.csv
data/example_alive_mini.rda
data/expected_2_unseed.rda
data/expected_2_unseen.csv
data/expected_2_unseen.rda
data/expected_2_unseen_mini.rda
data/expected_3_unseen.csv
data/expected_3_unseen.rda
data/outlyers.rda
man/ForestData.Rd man/check_rename_variable_col.Rd man/compute_ba.Rd man/compute_growth.Rd man/compute_mortality.Rd man/compute_recruitment.Rd man/correct_alive.Rd man/correct_all.Rd man/correct_recruits.Rd man/correct_size.Rd man/display_ba.Rd man/display_corrected_trees.Rd man/display_rates.Rd man/display_recruitment.Rd
packages.rds
tests/testthat.R tests/testthat/test-check_rename_variable_col.R tests/testthat/test-correct_alive.R tests/testthat/test-correct_size_main.R tests/testthat/test_compute_mortality.R tests/testthat/test_correct_alive.R
tests/testthat/test_data/example_alive.rda
tests/testthat/test_data/example_alive_mini.rda
tests/testthat/test_data/expected_2_unseen.rda
tests/testthat/test_data/expected_2_unseen_mini.rda
tests/testthat/test_data/expected_3_unseen.rda
tests/testthat/test_data/expected_3_unseen_mini.rda
EcoFoG/ForestData documentation built on June 7, 2019, 5:21 p.m.