Files in EcoFoG/ForestData

Post-inventory processing of Forest Census datasets

.#Extra/Elie/Elie/forestDataBasalArea.R .#Extra/Elie/Elie/forestDataClear.R .#Extra/Elie/Elie/forestDataMap.R .#Extra/Elie/Elie/functions.R .#Extra/Elie/Elie/mortality_by.R .#Extra/Elie/forestDataBasalArea.R .#Extra/Elie/forestDataClear.R .#Extra/Elie/forestDataMap.R .#Extra/Elie/functions.R .#Extra/OriginalCode/LisezMoi.Rmd

.#Extra/OriginalCode/LisezMoi.html

.#Extra/OriginalCode/ReadMe.txt

.#Extra/OriginalCode/add_missing.R .#Extra/OriginalCode/cleaning_dataV1.0.R .#Extra/OriginalCode/correctionsV1.0.R .#Extra/OriginalCode/dbh_correction.R .#Extra/OriginalCode/dbh_correction_1.R .#Extra/OriginalCode/gather.R .#Extra/OriginalCode/opening_and_correcting_data.R .#Extra/OriginalCode/overgrown_recruits.R .#Extra/OriginalCode/plot_corr.R .#Extra/OriginalCode/repl_missing.R .#Extra/OriginalCode/threshold.R .#Extra/OriginalCode/tree_status.R .#Extra/code profiling/compute_ba_profile.R .#Extra/code profiling/correct_alive_profile.R

.#Extra/current_corrections/Elie/_Rhistory

.#Extra/current_corrections/LisezMoi.Rmd

.#Extra/current_corrections/LisezMoi.html

.#Extra/current_corrections/ReadMe.txt

.#Extra/current_corrections/cleaning_dataV1.0.R .#Extra/current_corrections/cleaning_data_20180629.R .#Extra/current_corrections/correctionsV1.0.R .#Extra/current_corrections/correctionsV4.0.r .#Extra/dataset.R .#Extra/deprec/Elie/forestDataBasalArea.R .#Extra/deprec/Elie/forestDataClear.R .#Extra/deprec/Elie/forestDataMap.R .#Extra/deprec/Elie/functions.R .#Extra/deprec/code_profiling/benchmark_correct_alive.R .#Extra/deprec/code_profiling/compute_ba_profile.R .#Extra/deprec/code_profiling/correct_alive_profile.R .#Extra/deprec/compute_ba.R .#Extra/deprec/compute_growth.R .#Extra/deprec/correct_alive.R .#Extra/deprec/correct_alive_1.R .#Extra/deprec/correct_alive_opti.R .#Extra/deprec/correct_size.R .#Extra/deprec/correct_size_2.R .#Extra/deprec/correct_size_last.R .#Extra/deprec/data.R .#Extra/deprec/mortality_by.R .#Extra/deprec2/code_profiling/benchmark_correct_alive.R .#Extra/deprec2/code_profiling/correct_alive_profile.R .#Extra/deprec2/data.R .#Extra/metadata.pdf

.#Extra/outlyers.rda

.Rbuildignore

.github/workflows/check.yml

.gitignore

DESCRIPTION

ForestData.Rproj

LICENCE

LICENSE

NAMESPACE

R/Project.R R/aggregate_growth.R R/check_rename_variable_col.R

R/compute_all.R

R/compute_ba.R R/compute_growth_fin.R R/compute_mortality.R R/compute_rates.R R/compute_recruitment.R R/correct_alive.R R/correct_all.R R/correct_recruits.R R/correct_size_main.R R/datasets.R R/display_ba.R R/display_corrected_sizes.R R/display_growth.R R/display_mortality.R R/display_rates.R R/display_recruitment.R R/example_census-data.R R/prepare_forestdata.R R/reconstitute_POM.R

R/sysdata.rda

R/utils_display.R README.md

_Rhistory

_travis.yml

data/example_census.RData

data/example_recruits.RData

data/example_size_corr.RData

data/example_status_corr.RData

man/ForestData.Rd man/compute_ba.Rd man/compute_growth.Rd man/compute_mortality.Rd man/compute_rates.Rd man/compute_recruitment.Rd man/correct_alive.Rd man/correct_all.Rd man/correct_recruits.Rd man/correct_size.Rd man/display_ba.Rd man/display_corrected_trees.Rd man/display_growth.Rd man/display_mortality.Rd man/display_rates.Rd man/display_recruitment.Rd man/example_census.Rd man/example_recruits.Rd man/example_size_corr.Rd man/example_status_corr.Rd man/prepare_forestdata.Rd

packages.rds

pkgdown/_pkgdown.yml

tests/testthat.R tests/testthat/test-check_rename_variable_col.R tests/testthat/test-correct_alive.R

tests/testthat/test_data/example_alive.rda

tests/testthat/test_data/example_alive_mini.rda

tests/testthat/test_data/expected_2_unseen.rda

tests/testthat/test_data/expected_2_unseen_mini.rda

tests/testthat/test_data/expected_3_unseen.rda

tests/testthat/test_data/expected_3_unseen_mini.rda

vignettes/ForestData.Rmd

EcoFoG/ForestData documentation built on Jan. 20, 2021, 10:04 a.m.