snv_heatmaps: Outputs a heatmap of variant allele frequency.
In Elise-Merritt/metaITH: A Tool for Analyzing Intratumor Heterogeneity at Multiple Levels
View source: R/other_functions.R
Description
Takes in text file containing list of sample files.
Outputs a heatmap of variant allele frequency (vaf) of all variations for each sample.
Usage
1
snv_heatmaps(dna_dendro_list_file)
Arguments
dna_dendro_list_file
A text file containing a list of sample files, one file name per line. Each file contains a matrix with variant allele frequency of all the variations in each tumor region and normal.
Elise-Merritt/metaITH documentation built on Sept. 13, 2019, 12:57 a.m.
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View source: R/other_functions.R
Description
Takes in text file containing list of sample files. Outputs a heatmap of variant allele frequency (vaf) of all variations for each sample.
Usage
1 | snv_heatmaps(dna_dendro_list_file)
|
Arguments
dna_dendro_list_file |
A text file containing a list of sample files, one file name per line. Each file contains a matrix with variant allele frequency of all the variations in each tumor region and normal. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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