primer.prob: Primer probability
In EmmaDann/hexamerModel: Tools for modelling random hexamer primer binding
Description
Usage
Arguments
Value
View source: R/binding_model_functions.r
Description
Computes the probability of having a given sequence in the primer pool based on input nucleotide composition of primers
Usage
1
primer.prob(seq, probs = c(pA = 0.25, pT = 0.25, pG = 0.25, pC = 0.25))
Arguments
seq
string of DNA sequence
pA
fraction of A
pT
fraction of T
pG
fraction of G
pC
fraction of C
Value
numerical of probability
EmmaDann/hexamerModel documentation built on May 5, 2019, 4:48 p.m.
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Description Usage Arguments Value
View source: R/binding_model_functions.r
Description
Computes the probability of having a given sequence in the primer pool based on input nucleotide composition of primers
Usage
1 | primer.prob(seq, probs = c(pA = 0.25, pT = 0.25, pG = 0.25, pC = 0.25))
|
Arguments
seq |
string of DNA sequence |
pA |
fraction of A |
pT |
fraction of T |
pG |
fraction of G |
pC |
fraction of C |
Value
numerical of probability
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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