tests/testthat/test-stats.R

In EpiCompBio/bigimp: Make imputation of large datasets easier

context("bigimp stats function tests")

######################
library(bigimp)
library(testthat)
######################

######################
# Working directory for informal tests, should be from pkg/tests/testthat/:
# setwd("")
######################

######################
# Set a test set:
# Test set df:
set.seed(12345)
n <- 1000
df <- data.frame(var_id = rep(1:(n / 2), each = 2),
                 var_to_rep = rep(c("Pre", "Post"), n / 2),
                              x = rnorm(n),
                              y = rbinom(n, 1, 0.50),
                              z = rpois(n, 2)
                 )
# df

# Set variables used in more than one test:
# input_file <- "inst/extdata/df.tsv"
######################

######################
print("Function being tested: imp_stats_ks")

test_that("imp_stats_ks", {
  # # output is silent if successful
  # # matches values, attributes, and type:
  # expect_identical(func_test, expected_result)
  # # matches values and attributes, adjust with tolerance parameter:
  # expect_equal(func_test, expected_result)
  # expect_equal(2 * 2, 4)
  # # matches values only:
  # expect_equivalent(funct_test, verbatim_screen_output)
  # # match (partial) string output:
  # expect_output(str(dim(an_object), expected_result_as_string))
  # # match a more complex output stored in a file:
  # expect_output_file(str(airquality), "airq.txt", update = TRUE) # create a file
  # expect_output_file(str(airquality), "airq.txt") # compare the contents
  # # test non-Exported functions (triple colon):
  # expect_equal(my_pkg:::func_not_exported(airquality$Ozone), 37)
  }
  )
######################