initialize_biogridr: Initialize Local BioGRID Database

In EricEdwardBryant/biogridr: BioGRID Interaction Data

Description

Initialize your local BioGRID database with the latest interactions, or previously archived versions of the BioGRID database.

Usage

initialize_biogridr(db = getOption("biogridr.db"),
  url = getOption("biogridr.url"))

Arguments

db	Path to an SQLite database. Defaults to getOption('biogridr.db').
url	URL to BIOGRID-ALL-<VERSION>.tab2.zip archive. Defaults to getOption('biogridr.url').

Details

If the local BioGRID database has not been initialized, this function will run update_biogridr which downloads a BIOGRID-ALL-<VERSION>.tab2.zip to a temporary file, which is then written to an SQLite database.

See Also

update_biogridr

EricEdwardBryant/biogridr documentation built on May 6, 2019, 4:02 p.m.