plot.tbl_biogridr_aggregated: Plot a heatmap of aggregated BioGRID interactions

In EricEdwardBryant/biogridr: BioGRID Interaction Data

Description

Plot a clustered heatmap of aggregated biogrid interactions.

Usage

## S3 method for class 'tbl_biogridr_aggregated'
plot(x, type = "score", bounds = c(-3, 3),
  density = 1, clust = TRUE, ...)

Arguments

x	Aggregated BioGRID interactions (class = tbl_biogridr_aggregated)
type	A string indicating which type of interaction to plot ('score', 'positive', 'negative', 'physical', 'other')
clust	Whether or not to cluster the data. Defaults to TRUE.
...	additional arguments passed to cluster.
trunc	value to truncate data. Truncation occurs before clustering. Defaults to 3.

EricEdwardBryant/biogridr documentation built on May 6, 2019, 4:02 p.m.