Files in EvolEcolGroup/pastclim

Manipulate Time Series of Palaeoclimate Reconstructions

.github/CODE_OF_CONDUCT.md .github/CONTRIBUTING.md .github/ISSUE_TEMPLATE/bug_report.md LICENSE.md NEWS.md R/bioclim_vars.R R/check_available_datasets.R R/check_coords_names.R R/check_dataset_path.R R/check_times.R R/check_var_downloaded.R R/check_var_in_nc.R R/clean_data_path.R R/data.R R/datasets_docs.R R/df_from_region_series.R R/df_from_region_slice.R R/distance_from_sea.R R/download_chelsa.R R/download_chelsa_trace21k.R R/download_dataset.R R/download_etopo.R R/download_paleoclim.R R/download_worldclim_future.R R/download_worldclim_present.R R/filenames_chelsa_future.R R/filenames_chelsa_present.R R/filenames_chelsa_trace21k.R R/filenames_paleoclim.R R/filenames_worldclim_future.R R/filenames_worldclim_present.R R/get_available_datasets.R R/get_biome_classes.R R/get_data_path.R R/get_dataset_info.R R/get_downloaded_datasets.R R/get_file_for_dataset.R R/get_ice_mask.R R/get_land_mask.R R/get_mis_time_steps.R R/get_res.R R/get_sea_level.R R/get_time_steps.R R/get_vars_for_dataset.R R/global.R R/is_region_series.R R/koeppen_geiger.R R/list_available_datasets.R R/load_dataset_list.R R/load_etopo.R R/location_series.R R/location_slice.R R/location_slice_from_region_series.R R/make_binary_mask.R R/make_ice_mask.R R/make_land_mask.R R/pastclim-package.R R/pastclim_rast.R R/region_series.R R/region_slice.R R/sample_region_series.R R/sample_region_slice.R R/set_data_path.R R/slice_region_series.R R/time_bp.R R/time_bp_to_i_series.R R/time_bp_to_index.R R/update_dataset_list.R R/url_is_valid.R R/validate_nc.R R/var_labels.R R/vrt_get_meta.R R/vrt_set_meta.R R/ybp2date.R R/zzz.R README.md cran-comments.md data-raw/benchmark/benchmark.R data-raw/chelsa/chelsa_trace.R data-raw/chelsa/download_chelsa_trace21k.R data-raw/chelsa/filenames_chelsa_trace21k.R data-raw/chelsa/old/download_chelsa.R data-raw/chelsa/tests_chelsa_vrt.R data-raw/chelsa/vsicurl_notes.R data-raw/helper_functions/check_returns_in_documentation.R data-raw/helper_functions/make_filename_for_vars.R data-raw/helper_functions/submitting_to_cran.R data-raw/helper_functions/verify_completeness_of_variables.R data-raw/helper_functions/verify_files_by_dataset.R data-raw/make_data/biome4_classes.R data-raw/make_data/dataset_list_included.R data-raw/make_data/koeppen_classes.R data-raw/make_data/mis_boundaries.R data-raw/make_data/region_extent.R data-raw/make_data/region_outlines.R data-raw/make_extdata/internal_seas.R data-raw/make_extdata/make_dataset_list_for_chelsa_future.R data-raw/make_extdata/make_dataset_list_for_wc_future.R data-raw/readme.md data-raw/temp/niche_overlap.R data-raw/temp/patches.R data-raw/temp/test_koeppen.R data-raw/test_new_datasets/tests_new_datasets.Rmd data-raw/test_new_datasets/tests_new_datasets.pdf data-raw/to_update/create_example_dataset.R data-raw/to_update/downsample_CHELSA_TraCE21k_tiff.R data-raw/to_update/extract_topography_for_beyer2020_part1.R data-raw/to_update/extract_topography_for_beyer2020_rewrite.R data-raw/to_update/extract_topography_for_krapp2021_part1.R data-raw/to_update/repackage_beyer2020 rewrite.R data-raw/to_update/repackage_beyer2022h_split_annual_monthly.R data-raw/to_update/repackage_krapp2021.R data-raw/to_update/repackage_krapp2021_monthly.R data-raw/to_update/rewrite_global_attributes.R data-raw/to_update/superseded/create_internal_seas_raster.R data-raw/to_update/superseded/recompute_bio15_for_Beyer2020.R data-raw/to_update/superseded/repackage_beyer2020_split_annual_monthly.R data-raw/to_update/update_meta_data_of_vars_in_nc.R man/Barreto2023.Rd man/Beyer2020.Rd man/CHELSA_2.1.Rd man/CHELSA_trace21k_1.0.Rd man/Example.Rd man/HYDE_3.3_baseline.Rd man/Krapp2021.Rd man/WorldClim_2.1.Rd man/bioclim_vars-methods.Rd man/biome4_classes.Rd man/check_available_dataset.Rd man/check_available_variable.Rd man/check_coords_names.Rd man/check_dataset_path.Rd man/check_time_vars.Rd man/check_var_downloaded.Rd man/check_var_in_nc.Rd man/clean_data_path.Rd man/climate_for_locations.Rd man/climate_for_time_slice.Rd man/copy_example_data.Rd man/df_from_region_series.Rd man/df_from_region_slice.Rd man/distance_from_sea.Rd man/dot-cv.Rd man/download_chelsa.Rd man/download_chelsa_trace21k.Rd man/download_dataset.Rd man/download_etopo.Rd man/download_paleoclim.Rd man/download_worldclim_future.Rd man/download_worldclim_present.Rd man/filenames_chelsa_future.Rd man/filenames_chelsa_present.Rd man/filenames_chelsa_trace21k.Rd man/filenames_paleoclim.Rd man/filenames_worldclim_future.Rd man/filenames_worldclim_present.Rd man/get_available_datasets.Rd man/get_biome_classes.Rd man/get_data_path.Rd man/get_dataset_info.Rd man/get_downloaded_datasets.Rd man/get_ice_mask.Rd man/get_land_mask.Rd man/get_mis_time_steps.Rd man/get_resolution.Rd man/get_sea_level.Rd man/get_time_bp_steps.Rd man/get_var_meta.Rd man/get_varname.Rd man/get_vars_for_dataset.Rd man/help_console.Rd man/is_region_series.Rd man/koeppen_classes.Rd man/koeppen_geiger-methods.Rd man/list_available_datasets.Rd man/load_dataset_list.Rd man/load_etopo.Rd man/location_series.Rd man/location_slice.Rd man/location_slice_from_region_series.Rd man/make_binary_mask.Rd man/make_ice_mask.Rd man/make_land_mask.Rd man/mis_boundaries.Rd man/mode.Rd man/paleoclim_1.0.Rd man/pastclim-package.Rd man/pastclim_rast.Rd man/region_extent.Rd man/region_outline.Rd man/region_outline_union.Rd man/region_series.Rd man/region_slice.Rd man/sample_region_series.Rd man/sample_region_slice.Rd man/sample_rs_fixed.Rd man/sample_rs_variable.Rd man/set_data_path.Rd man/slice_region_series.Rd man/time_bp.Rd man/time_bp_to_i_series.Rd man/time_bp_to_index.Rd man/time_series_for_locations.Rd man/update_dataset_list.Rd man/url_is_valid.Rd man/validate_nc.Rd man/var_labels.Rd man/vrt_get_meta.Rd man/vrt_set_meta.Rd man/ybp2date.Rd pkgdown/assets/pastclim_cheatsheet.pdf tests/spelling.R tests/testthat.R tests/testthat/test_check_dataset_path.R tests/testthat/test_check_time_vars.R tests/testthat/test_clean_data_path.R tests/testthat/test_df_from_region_series.R tests/testthat/test_df_from_region_slice.R tests/testthat/test_distance_from_sea.R tests/testthat/test_download_dataset.R tests/testthat/test_filenames_chelsa_future.R tests/testthat/test_filenames_chelsa_present.R tests/testthat/test_filenames_chelsa_trace21k.R tests/testthat/test_filenames_hyde.R tests/testthat/test_filenames_paleoclim.R tests/testthat/test_filenames_worldclim_future.R tests/testthat/test_filenames_worldclim_present.R tests/testthat/test_get_available_dataset.R tests/testthat/test_get_biome_classes.R tests/testthat/test_get_downloaded_datasets.R tests/testthat/test_get_file_for_dataset.R tests/testthat/test_get_ice_mask.R tests/testthat/test_get_land_mask.R tests/testthat/test_get_mis_time_steps.R tests/testthat/test_get_set_data_path.R tests/testthat/test_get_time_steps.R tests/testthat/test_get_vars_for_dataset.R tests/testthat/test_is_region_series.R tests/testthat/test_koeppen_geiger.R tests/testthat/test_load_dataset_list.R tests/testthat/test_location_series.R tests/testthat/test_location_slice.R tests/testthat/test_location_slice_from_region_series.R tests/testthat/test_pastclim_rast.R tests/testthat/test_region_series.R tests/testthat/test_region_slice.R tests/testthat/test_remote_files.R tests/testthat/test_sample_region_series.R tests/testthat/test_sample_region_slice.R tests/testthat/test_slice_region_series.R tests/testthat/test_time_bp.R tests/testthat/test_time_bp_to_i_series.R tests/testthat/test_time_bp_to_index.R tests/testthat/test_validate_nc.R tests/testthat/test_var_labels.R tests/testthat/test_vrt_set_get_meta.R tests/testthat/test_vsi_dataset.R tests/testthat/test_ybp2date.R vignettes/a0_pastclim_overview.Rmd vignettes/a1_available_datasets.Rmd vignettes/a2_custom_datasets.Rmd vignettes/a3_pastclim_present_and_future.Rmd