getPEPairs: This function returns promoter-enhancer (P-E) pairs based on...
In FabianErdel/RWire: Identification of co-regulated genomic regions based on correlation analysis
Description
Usage
Arguments
Value
Description
This function returns promoter-enhancer (P-E) pairs based on a correlation matrix
Usage
1
getPEPairs(cm, cutoff = 0, window = .Machine$double.xmax, max.only = F)
Arguments
cm
Correlation matrix (rows: promoters, columns: enhancers)
cutoff
Cutoff value required for P-E assignment
window
Genomic window for P-E assignment
Value
P-E pairs
FabianErdel/RWire documentation built on May 26, 2019, 7:26 a.m.
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Description Usage Arguments Value
Description
This function returns promoter-enhancer (P-E) pairs based on a correlation matrix
Usage
1 | getPEPairs(cm, cutoff = 0, window = .Machine$double.xmax, max.only = F)
|
Arguments
cm |
Correlation matrix (rows: promoters, columns: enhancers) |
cutoff |
Cutoff value required for P-E assignment |
window |
Genomic window for P-E assignment |
Value
P-E pairs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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