Man pages for FeifeiXiaoUSC/FLCNA
Simultaneous CNV Detection And Subclone Clustering With Single Cell Sequencing Data
| CNAcluster | CNAcluster |
| CNA.out | Shared CNA output |
| CorrectGC | GC content correction |
| CorrectMAP | Mapp correction |
| CorrectSize | bin size correction |
| count.mu | count.mu |
| dmvnorm_log | dmvnorm_log |
| FLCNA | FLCNA analysis |
| FLCNA_LQA | Esimation of mean matrix |
| FLCNA_normalization | FLCNA normalization |
| FLCNA_normalization_ref | FLCNA normalization with reference |
| FLCNA_QC | FLCNA_QC |
| flowCalcCpp | Matrix calculation in RcppArmadillo. |
| gausianMixture | Gaussian Mixture Model for CNA clustering |
| getState | CNA states |
| nopenalty | Clustering without penalty term |
| updateEM | Update parameters using EM algorithm |
