CorrectGC: GC content correction

In FeifeiXiaoUSC/FLCNA: Simultaneous CNV Detection And Subclone Clustering With Single Cell Sequencing Data

GC content correction

Description

Normalization according to GC content.

Normalization according to GC content.

Usage

CorrectGC(RC, GCContent, step)

CorrectGC(RC, GCContent, step)

Arguments

RC	A p-dimensional data vector. The read counts for a sample.
GCContent	A p-dimensional vector with gc concent.
step	Step value, a constant, used in the GC correlation procedure.

Value

The output for GC content correlation.

The output for GC content correlation.

FeifeiXiaoUSC/FLCNA documentation built on March 29, 2025, 10:48 p.m.