API for FelixErnst/Structstrings
Implementation of the dot bracket annotations with Biostrings

Global functions
CompressedSplitDotBracketDataFrameList-class Man page
DB Man page
DBDF Man page
DBDFL Man page
DBS Man page
DBSL Man page
DOTBRACKET_ALPHABET Man page
DOTBRACKET_CHAR_VALUES Man page
DotBracketDataFrame Man page
DotBracketDataFrame-class Man page
DotBracketDataFrameList Man page
DotBracketDataFrameList-class Man page
DotBracketString Man page
DotBracketString-class Man page
DotBracketStringSet Man page
DotBracketStringSet-class Man page
DotBracketStringSet-io Man page
DotBracketStringSetList Man page
DotBracketStringSetList-class Man page
LoopIndexList Man page
LoopIndexList-class Man page
SDBDFL Man page
STRUCTURE_CLOSE_CHR Man page
STRUCTURE_NEUTRAL_CHR Man page
STRUCTURE_OPEN_CHR Man page
SplitDotBracketDataFrameList Man page
SplitDotBracketDataFrameList-class Man page
Structstrings Man page
Structstrings-data Man page
Structstrings-internals Man page
Structstrings-package Man page
StructuredRNAStringSet Man page
StructuredRNAStringSet-class Man page
StructuredXStringSet Man page
[<-,DotBracketDataFrame-method Man page
alphabet,DotBracketString-method Man page
colnames<-,CompressedSplitDotBracketDataFrameList-method Man page
convertAnnotation Man page
convertAnnotation,DotBracketString-method Man page
convertAnnotation,DotBracketStringSet-method Man page
convertAnnotation,DotBracketStringSetList-method Man page
dbs Man page
dotbracket Man page
dotbracket,StructuredXStringSet-method Man page
dotbracket<- Man page
dotbracket<-,StructuredXStringSet-method Man page
encoding,DotBracketString-method Man page
getBasePairing Man page
getBasePairing,DotBracketString-method Man page
getBasePairing,DotBracketStringSet-method Man page
getBasePairing,StructuredXStringSet-method Man page
getDotBracket Man page
getDotBracket,CompressedDotBracketDataFrameList-method Man page
getDotBracket,DotBracketDataFrame-method Man page
getDotBracket,DotBracketDataFrameList-method Man page
getLoopIndices Man page
getLoopIndices,CompressedSplitDotBracketDataFrameList-method Man page
getLoopIndices,DotBracketDataFrame-method Man page
getLoopIndices,DotBracketDataFrameList-method Man page
getLoopIndices,DotBracketString-method Man page
getLoopIndices,DotBracketStringSet-method Man page
getLoopIndices,SplitDotBracketDataFrameList-method Man page
getLoopIndices,StructuredXStringSet-method Man page
readDotBracketStringSet Man page
readStructuredRNAStringSet Man page
saveDotBracketStringSet Man page
seq Man page
writeDotBracketStringSet Man page
writeStructuredXStringSet Man page
FelixErnst/Structstrings documentation built on June 13, 2019, 7:12 p.m.