LoopIndexList: LoopIndexList: base pairing information as a list of integer...

Description Usage Arguments Value Examples

View source: R/Structstrings-LoopIndexList.R

Description

With loop indeces base pairing information can be represented by giving each base pair a number and increasing/decreasing it with each opened/closed base pair. This information can be used for further analysis of the represented structure.

Usage

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Arguments

...

the integer input vectors.

Value

a LoopIndexList object.

Examples

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# if the object is create manually make sure it is a valid structure
# information. Otherwise an error is thrown.
lil <- LoopIndexList(list(c(1L,2L,3L,3L,3L,2L,1L,0L,5L,6L,6L,5L),
                       c(1L,2L,2L,2L,2L,2L,1L,0L,5L,6L,6L,5L)))

FelixErnst/Structstrings documentation built on Sept. 15, 2019, 3:02 a.m.